Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0036 | ATGTCATCTGGAAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTTTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTTTTGATTCTCGGCATCTTATCTGTATGGGTGATGTTTCGGAGAAAAACAAGGAGATCCCCTGAAAACTTCTCTATTTCTCAAATACCAAATGTCTCAAAAGATATTAAGGTGGACAGAATAGCGACTCAATCTGCTCACCACAATCATCTCGAGAGTCTTTATCTTTCCATTAATGATAAATCAAGTGACAAGAACTCGGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCAAGTGATCATGATAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGGGTTTTTAGTTCACATTCAGGAGAAGAAGGAAGCTCTGGAACTGTTAGAAAGCAGTCTTCCATGTCATATGGAGGGTATGGAGGACATGTGACTGCCTCTCCTCTTGTTGGCTTGCCCGAAATTTCACATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAGTCGTTTCACTGCTGACAATGTGCTTGGTGAAGGGGGTTATGGGGTTGTCTATAAAGGCAGACTGATAAATGGAACTGAAGTTGCAGTGAAGAAACTTCTCAATAATATGGGACAAGCAGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATTGGCCATGTAAGACACAAGAATCTTGTACGGCTCCTGGGCTATTGCATTGAAGGAGTTCATAGGATGTTGGTTTATGAATATGTGAATAATGGCAACTTAGAACAATGGTTACATGGGGCTATGCGACAACATGGCACCCTTACTTGGGAGGCCCGTATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTAGCATATTTACATGAAGCAATTGAACCGAAGGTTGTCCATAGAGACATAAAATCAAGCAACATCTTAATCGATGATGAATTTAATGCAAAGGTTTCAGATTTTGGATTGGCTAAACTCTTGGATGCAGGAGAGAGTCATATCACAACTAGAGTGATGGGAACATTTGGCTACGTGGCACCCGAGTATGCGAACACTGGCTTGTTAAACGAGAAGAGTGACATTTACAGCTTTGGTGTTCTCCTTCTAGAATCAATTACAGGAAGGGACCCTGTGGACTATGGGCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTAGGCACAAGGAGAGCGGAGGAAGTTATAGACCCGAGTCTTGAAACAAAACCCGCTACACGGGCGTTGAAACGTGCCCTTCTAATTGCACTTAGGTGTGTGGATCCTGAGTCAGATAAGAGACCAAAAATGACTCAAGTTGTTAGGATGCTTGAAGCTGACGACTACCCATCCCGTGAGGATCGGAGGAGCCAAAAGAGCAGCACAGCAAACTCGGAGATCGAATCCACGAAAGAGATCTTGAGTCAAGCCGAGGTTGGAAGTAAACCAGGGGAATCACAAAGCAGACCTGCAAATGCATGA | 1539 | 43.21 | MSSGSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSISQIPNVSKDIKVDRIATQSAHHNHLESLYLSINDKSSDKNSEKMIGHLGMSKSSDHDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGHVTASPLVGLPEISHLGWGHWFTLRDLEFATSRFTADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLESITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVIDPSLETKPATRALKRALLIALRCVDPESDKRPKMTQVVRMLEADDYPSREDRRSQKSSTANSEIESTKEILSQAEVGSKPGESQSRPANA | 512 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 518877 | 521847 | + | Hsped.02g00360.1 | Hepe02g0036 | 561537 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0036 | 512 | Gene3D | Phosphorylase Kinase; domain 1 | 174 | 267 | - | - | |
Hepe02g0036 | 512 | ProSitePatterns | Protein kinases ATP-binding region signature. | 198 | 221 | IPR017441 | GO:0005524(InterPro) | |
Hepe02g0036 | 512 | MobiDBLite | consensus disorder prediction | 481 | 512 | - | - | |
Hepe02g0036 | 512 | SUPERFAMILY | Protein kinase-like (PK-like) | 176 | 469 | IPR011009 | - | |
Hepe02g0036 | 512 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 314 | 326 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Hepe02g0036 | 512 | SMART | serkin_6 | 192 | 463 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g0036 | 512 | Gene3D | Transferase(Phosphotransferase) domain 1 | 268 | 482 | - | - | |
Hepe02g0036 | 512 | FunFam | Putative receptor-like protein kinase | 174 | 267 | - | - | |
Hepe02g0036 | 512 | Coils | Coil | 212 | 232 | - | - | |
Hepe02g0036 | 512 | MobiDBLite | consensus disorder prediction | 463 | 512 | - | - | |
Hepe02g0036 | 512 | Pfam | Protein kinase domain | 194 | 461 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g0036 | 512 | ProSiteProfiles | Protein kinase domain profile. | 192 | 456 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Hepe02g0036 | 512 | CDD | STKc_IRAK | 198 | 464 | - | - | |
Hepe02g0036 | 512 | MobiDBLite | consensus disorder prediction | 463 | 480 | - | - | |
Hepe02g0036 | 512 | FunFam | Putative receptor-like serine/threonine-protein kinase | 268 | 478 | - | - | |
Hepe02g0036 | 512 | PANTHER | OS01G0323000 PROTEIN | 6 | 490 | IPR052232 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0036 | Hepe-Chr2:518877 | Hepe03g0012 | Hepe-Chr3:157791 | 3.92e-181 | dispersed | |
Hepe01g1477 | Hepe-Chr1:80076338 | Hepe02g0036 | Hepe-Chr2:518877 | 3.77e-71 | wgd | |
Hepe02g0036 | Hepe-Chr2:518877 | Hepe08g0621 | Hepe-Chr8:5451857 | 7.18e-278 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
72509 | PF00069 | Pkinase | 5.60E-48 | CL0016 | Hepe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0036 | - | - | - | 0.0 |