Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0036 ATGTCATCTGGAAGTACTTTGAATACAGAATTGTCAAAGAAAACACCCTTCCTTGGTTTGTCCCTATGGGTTTTGATCTGCTTATGTGTTGGTGCATTTATTGTTTTGATTCTCGGCATCTTATCTGTATGGGTGATGTTTCGGAGAAAAACAAGGAGATCCCCTGAAAACTTCTCTATTTCTCAAATACCAAATGTCTCAAAAGATATTAAGGTGGACAGAATAGCGACTCAATCTGCTCACCACAATCATCTCGAGAGTCTTTATCTTTCCATTAATGATAAATCAAGTGACAAGAACTCGGAGAAGATGATTGGTCATTTGGGTATGAGCAAGTCAAGTGATCATGATAACATAAGCCAATGCAGCTCCAATTATCATCATGAAAGGGTTTTTAGTTCACATTCAGGAGAAGAAGGAAGCTCTGGAACTGTTAGAAAGCAGTCTTCCATGTCATATGGAGGGTATGGAGGACATGTGACTGCCTCTCCTCTTGTTGGCTTGCCCGAAATTTCACATCTTGGTTGGGGTCATTGGTTTACACTCAGGGATCTAGAATTTGCGACAAGTCGTTTCACTGCTGACAATGTGCTTGGTGAAGGGGGTTATGGGGTTGTCTATAAAGGCAGACTGATAAATGGAACTGAAGTTGCAGTGAAGAAACTTCTCAATAATATGGGACAAGCAGAGAAAGAATTTAGGGTTGAAGTGGAGGCCATTGGCCATGTAAGACACAAGAATCTTGTACGGCTCCTGGGCTATTGCATTGAAGGAGTTCATAGGATGTTGGTTTATGAATATGTGAATAATGGCAACTTAGAACAATGGTTACATGGGGCTATGCGACAACATGGCACCCTTACTTGGGAGGCCCGTATGAAGGTGCTTCTTGGCACTGCTAAGGCGCTAGCATATTTACATGAAGCAATTGAACCGAAGGTTGTCCATAGAGACATAAAATCAAGCAACATCTTAATCGATGATGAATTTAATGCAAAGGTTTCAGATTTTGGATTGGCTAAACTCTTGGATGCAGGAGAGAGTCATATCACAACTAGAGTGATGGGAACATTTGGCTACGTGGCACCCGAGTATGCGAACACTGGCTTGTTAAACGAGAAGAGTGACATTTACAGCTTTGGTGTTCTCCTTCTAGAATCAATTACAGGAAGGGACCCTGTGGACTATGGGCGTCCTGCTAATGAGGTTAATCTTGTTGAGTGGTTAAAAGTGATGGTAGGCACAAGGAGAGCGGAGGAAGTTATAGACCCGAGTCTTGAAACAAAACCCGCTACACGGGCGTTGAAACGTGCCCTTCTAATTGCACTTAGGTGTGTGGATCCTGAGTCAGATAAGAGACCAAAAATGACTCAAGTTGTTAGGATGCTTGAAGCTGACGACTACCCATCCCGTGAGGATCGGAGGAGCCAAAAGAGCAGCACAGCAAACTCGGAGATCGAATCCACGAAAGAGATCTTGAGTCAAGCCGAGGTTGGAAGTAAACCAGGGGAATCACAAAGCAGACCTGCAAATGCATGA 1539 43.21 MSSGSTLNTELSKKTPFLGLSLWVLICLCVGAFIVLILGILSVWVMFRRKTRRSPENFSISQIPNVSKDIKVDRIATQSAHHNHLESLYLSINDKSSDKNSEKMIGHLGMSKSSDHDNISQCSSNYHHERVFSSHSGEEGSSGTVRKQSSMSYGGYGGHVTASPLVGLPEISHLGWGHWFTLRDLEFATSRFTADNVLGEGGYGVVYKGRLINGTEVAVKKLLNNMGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGVHRMLVYEYVNNGNLEQWLHGAMRQHGTLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDDEFNAKVSDFGLAKLLDAGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLESITGRDPVDYGRPANEVNLVEWLKVMVGTRRAEEVIDPSLETKPATRALKRALLIALRCVDPESDKRPKMTQVVRMLEADDYPSREDRRSQKSSTANSEIESTKEILSQAEVGSKPGESQSRPANA 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 518877 521847 + Hsped.02g00360.1 Hepe02g0036 561537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0036 512 Gene3D Phosphorylase Kinase; domain 1 174 267 - -
Hepe02g0036 512 ProSitePatterns Protein kinases ATP-binding region signature. 198 221 IPR017441 GO:0005524(InterPro)
Hepe02g0036 512 MobiDBLite consensus disorder prediction 481 512 - -
Hepe02g0036 512 SUPERFAMILY Protein kinase-like (PK-like) 176 469 IPR011009 -
Hepe02g0036 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 314 326 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0036 512 SMART serkin_6 192 463 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0036 512 Gene3D Transferase(Phosphotransferase) domain 1 268 482 - -
Hepe02g0036 512 FunFam Putative receptor-like protein kinase 174 267 - -
Hepe02g0036 512 Coils Coil 212 232 - -
Hepe02g0036 512 MobiDBLite consensus disorder prediction 463 512 - -
Hepe02g0036 512 Pfam Protein kinase domain 194 461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0036 512 ProSiteProfiles Protein kinase domain profile. 192 456 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0036 512 CDD STKc_IRAK 198 464 - -
Hepe02g0036 512 MobiDBLite consensus disorder prediction 463 480 - -
Hepe02g0036 512 FunFam Putative receptor-like serine/threonine-protein kinase 268 478 - -
Hepe02g0036 512 PANTHER OS01G0323000 PROTEIN 6 490 IPR052232 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0036 Hepe-Chr2:518877 Hepe03g0012 Hepe-Chr3:157791 3.92e-181 dispersed
Hepe01g1477 Hepe-Chr1:80076338 Hepe02g0036 Hepe-Chr2:518877 3.77e-71 wgd
Hepe02g0036 Hepe-Chr2:518877 Hepe08g0621 Hepe-Chr8:5451857 7.18e-278 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72509 PF00069 Pkinase 5.60E-48 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0036 - - - 0.0