Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0037 ATGTCAAATGATGAAGCCAAAAATCTGTACCAGCAGTATGATCCATTTCATTACAACCAGCTGGATATGAACCGTTCAATCTTCCAACAACAGCCGTTGGATCCTGCTTTGATGAGCTTCACAAACTTCTTCGACACGTCGTTAGACTACCACAGCCTGTCGAGGGCGTTCGACGTGTCGTGTTCTTCATCGGAAGTCATTTGTCCGCCGGTGGACGACATGTCGAAAAACAAGGGTTCAGGTGGAGGCAAGAGTTTAAACGTCCAATCTTCGACGACGCAAAATTCATCGGTGTCGTGTTCGTCTAATGAGGCTGTGGCTGAAGAAGATTCAGTCAAGAGCAAGAAACAGGACACAAAAGAGTGCGAGAATAAAGATGAAGAAAAGTCTAAGAAACAGAACAACATATCAAAAAAGAAAGAGAAACGGGAGAGGGAGCCCCGCTTTGCTTTCTTGACTAAGAGTGAGATTGATCACCTCGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCAGTCAAAAATAGTCCTTACCCCAGAAGTTACTATAGATGCACGAGTCAAAAATGTGTAGTGAAAAAACGAGTTGAAAGATCATATCAAGATCCATCTGTGGTGATAACTACATATGAAGGCCAACACAACCACCATTGTCCAGCTACACTCCGAGGCCATTCTGCAGGAATGTTGCCGTCTCCGTTTTACGCATCGGCATCGGCATCGGCAGCCTCCTCCGGGCCTACGCTTCCTCAAGAACTCTTCTCGCATTTGCTACCGATCACGAACTGCCAAACCGACCCGGCCTCGATGATGTACCAAAATCTAAACCTCCAACAACACCTTCAAATGCCTGATCATTATGGTTTATTGCAAGATTTGTTCACTCAAAAATAG 897 44.7 MSNDEAKNLYQQYDPFHYNQLDMNRSIFQQQPLDPALMSFTNFFDTSLDYHSLSRAFDVSCSSSEVICPPVDDMSKNKGSGGGKSLNVQSSTTQNSSVSCSSNEAVAEEDSVKSKKQDTKECENKDEEKSKKQNNISKKKEKREREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCVVKKRVERSYQDPSVVITTYEGQHNHHCPATLRGHSAGMLPSPFYASASASAASSGPTLPQELFSHLLPITNCQTDPASMMYQNLNLQQHLQMPDHYGLLQDLFTQK 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 527099 529330 - Hsped.02g00370.1 Hepe02g0037 561538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0037 298 MobiDBLite consensus disorder prediction 70 145 - -
Hepe02g0037 298 MobiDBLite consensus disorder prediction 108 145 - -
Hepe02g0037 298 SMART WRKY_cls 160 219 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0037 298 MobiDBLite consensus disorder prediction 80 107 - -
Hepe02g0037 298 Pfam WRKY DNA -binding domain 161 218 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0037 298 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0037 298 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 94 228 IPR044810 GO:0003700(InterPro)
Hepe02g0037 298 FunFam WRKY transcription factor 57 146 220 - -
Hepe02g0037 298 Coils Coil 122 142 - -
Hepe02g0037 298 Gene3D WRKY domain 145 221 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0037 298 ProSiteProfiles WRKY domain profile. 155 220 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0037 Hepe-Chr2:527099 Hepe04g1972 Hepe-Chr4:74567774 2.17e-52 dispersed
Hepe07g0802 Hepe-Chr7:9799252 Hepe02g0037 Hepe-Chr2:527099 7.33e-16 dispersed
Hepe02g0037 Hepe-Chr2:527099 Hepe08g0620 Hepe-Chr8:5443619 5.18e-60 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54920 PF03106 WRKY 5.60E-25 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0037 - - - 0.0