Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0047 ATGCAGACCAATCATCGCAAGAAGAATTCGGCAGAATTGGACTTTTTCTCTGAATATGGCGATGCCAACAGATTCAAAATTCAGGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTATCACTAATGAAAAAGTGGCAATAAAGAAGATACATGATATTTTTGAACATGTATCTGATGCTGCTCGTATTCTTCGTGAGATAAAGCTGCTCAGACTTCTACGTCATCCCGATATTGTTGAAATCAAACACATTATGTTACCACCTTCTCGTAGAGGTTTCAAAGATATTTTTGTTGTGTTTGAGCTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAATGATGATTTAACGAAAGAGCACTATCAATTTTTCCTTTACCAGCTACTCCGTGCACTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTCAGTGACACTCCGACAACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGCTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGATGCATATTTGCTGAAGTACTAACCGGAAAACCACTTTTTCCCGGTAAAAATGTTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCTTCGTTAGATACCATTTCTAGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCACAGAAGTTCCCAAATGCGGATCCTCTAGCCCTGCAATTACTACAACGATTGCTTGCGTTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCATTGTCAGATCCTTACTTTAAGGGGCTGGCAAGAGTTGAGAGGGAACCCTCTTGCCAGTCAATCTCAAAGGTGGAGTTTGAATTTGAGAGGAGAAAGGTCACAAAGGACGACATTCGCGAGCTGATATTCCGGGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGAGCAAATTTTCTTTATCCAAGTGCACTCGACCAGTTCAAAAAACAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTCTCGAACGAAAGCATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCAACATCAAATATCGTTTCGTTTAAAGACCGATATGCACCAGCAGGTTCGTACAGCAGCCAGCATTACAGAGATTCACCAGCACAGAGAATTGCTGCTTCTCAAGCCAAGCCTGGAAGAATTTCGGGCCCGGTCATGCCATATGATAGTGGAAGTATCGTCAAAGATGCGTACGACCCAAGAATGTTAATTAGAAGTGCCCTCCCTTCCCATGCTATCCATCCAACATACTATTACCAGCAATCTTGCGGCCAAAATGAAGATAGATCAGCAACAGGGGCTGAGCAGGACAACACTTCCTTGCAATGCAAACAAGCCCCTCAATGTGGAATGGCAGCCAAATTAGCAGCAGATTCAGCAGCTACTAGTGCTTTCTCAAATCCTTTTTTTATGACGCGTGTAGGGGTGCACAAGGTGGGAAACAATGACCGTGCTGCACGTTTGCAAGCAAACGCTCAATACGATGCTGGAACCATTGCTGCTGCAACTGCTACTGCCCATAGGAACGCTGGTGCAGTCGAGTATGGTATGACAAGAATGTATTAG 1821 42.5 MQTNHRKKNSAELDFFSEYGDANRFKIQEVIGKGSYGVVCSAVDTITNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPLALQLLQRLLAFDPKDRPTAEEALSDPYFKGLARVEREPSCQSISKVEFEFERRKVTKDDIRELIFREILEYHPQLLKDYLNGTERANFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSYSSQHYRDSPAQRIAASQAKPGRISGPVMPYDSGSIVKDAYDPRMLIRSALPSHAIHPTYYYQQSCGQNEDRSATGAEQDNTSLQCKQAPQCGMAAKLAADSAATSAFSNPFFMTRVGVHKVGNNDRAARLQANAQYDAGTIAAATATAHRNAGAVEYGMTRMY 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 604593 609500 + Hsped.02g00470.1 Hepe02g0047 561548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0047 606 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Hepe02g0047 606 SMART serkin_6 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0047 606 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0047 606 FunFam Mitogen-activated protein kinase 16 118 - -
Hepe02g0047 606 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Hepe02g0047 606 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524(InterPro)
Hepe02g0047 606 FunFam Mitogen-activated protein kinase 111 339 - -
Hepe02g0047 606 MobiDBLite consensus disorder prediction 442 472 - -
Hepe02g0047 606 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Hepe02g0047 606 Pfam Protein kinase domain 26 316 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0047 606 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 23 357 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Hepe02g0047 606 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0047 606 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0047 Hepe-Chr2:604593 Hepe03g0156 Hepe-Chr3:1882401 2.65e-251 dispersed
Hepe07g0951 Hepe-Chr7:12709250 Hepe02g0047 Hepe-Chr2:604593 4.61e-104 transposed
Hepe07g0952 Hepe-Chr7:12711418 Hepe02g0047 Hepe-Chr2:604593 2.98e-123 transposed
Hepe02g0047 Hepe-Chr2:604593 Hepe08g0618 Hepe-Chr8:5410052 1.87e-255 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72510 PF00069 Pkinase 1.90E-66 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0047 - - - 0.0