Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g0052 | ATGGGTCTGCCTTGGATTGGCGAAACAATGGATTTTTACAGAGCCCAACGTAAGAACAGGTTGTTCGAGGATTTTGTTGGGCCTCGAGTTGCTAAATTTGGCAAAATTTTCAAAACAAATTTGATGGGTTCGGCAACTGTGGTCGTAAATGGAGCTGAAGCCAACAGGTTTTTCTTGTCGAATGAGTTTAAGTTGGTGGTTAGCTCGTGGCCATCGGCCTCTGTTCAGCTGATGGGTGAAGAATGCATCATGCAGAAGCAAGGTGAAAATCATCGATGTGTTCGTGGCCTTATTGGTGCTAGCCTTGCCACTGCTAGTCTTGAGGCTATGATGCCTAAATTGTGTACTACAATTCAGTCTTATTTGGATACCAAATGGCTTGGCCATGACACTATTGGTTTGTTTCACTCCGCGAAAGCATTGACGTTTACGATAGTGTTCGAGTGTTTGATGGGTATCGAAGTTGAGCCAGATGTGTTGGCGACGTTCGAGAGAGTTTTGGAAGGAGTTTTTGCACTACCGTTCAGGTTTCCCGGCTCAAAGTTTTCGAGAGCCAAGAAAGCGAGGTTGGAGATAGGGAAAATGCTAAGGGAAGTGGTGATAGAGAAAAGGAGGAGAATTGAAGGAAAGCTAGAAGAAGAGGAAGAATGTGGGTCATTGCTTTCAAGGATGGTGACAGCAATGATAAGAGGGGAGATTAGTGAAGTGGAAGTCATAGACAACGTGGTTTTGCTTGTTTTTGCAGCTCATGACACAACCTCCTTTGCCATTGCCATGACTTTCAAAATGTTGGCTCAGCATTCAGATTGCTACTCACTTCTTCTCCAGGAACATGCCGACATAGTGAGAAGCAAGGAACCAGGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAGTATACTTGGCAGGTTGCTCGTGAGAGCATTCGACTGTTTCCCCCTATATTCGGTTCTTTCAGGAAAGCGATTTCAGACATTGAATACGATGGATTCTTCATTCCCAAAGGATGGAAGGTCTTGTGGACGATGTACGGAACACATTACGAAGAAGAGTATTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTATTTCCCAGTATGTATATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTAGCCAAATTGAACATCCTCATCTTTATACACTTTGTTGTAACTCGTTATGATTGGAATTTAGTCCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTTTCCCTGCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGCTTGTCCCAATGAACAGCAAATGTAA | 1338 | 43.57 | MGLPWIGETMDFYRAQRKNRLFEDFVGPRVAKFGKIFKTNLMGSATVVVNGAEANRFFLSNEFKLVVSSWPSASVQLMGEECIMQKQGENHRCVRGLIGASLATASLEAMMPKLCTTIQSYLDTKWLGHDTIGLFHSAKALTFTIVFECLMGIEVEPDVLATFERVLEGVFALPFRFPGSKFSRAKKARLEIGKMLREVVIEKRRRIEGKLEEEEECGSLLSRMVTAMIRGEISEVEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHSDCYSLLLQEHADIVRSKEPGQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAISDIEYDGFFIPKGWKVLWTMYGTHYEEEYFEDPLSFKPSRFEEPISQYVYVPFGGGPRACAGYQLAKLNILIFIHFVVTRYDWNLVHPDEPIIMDPLPFPAHGMPIKISPKSEACPNEQQM | 445 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 639312 | 641248 | - | Hsped.02g00520.1 | Hepe02g0052 | 561553 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g0052 | 445 | SUPERFAMILY | Cytochrome P450 | 2 | 434 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | E-class P450 group I signature | 374 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | E-class P450 group I signature | 237 | 254 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | E-class P450 group I signature | 30 | 49 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | E-class P450 group I signature | 384 | 407 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | E-class P450 group I signature | 343 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | P450 superfamily signature | 248 | 265 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | P450 superfamily signature | 304 | 315 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | P450 superfamily signature | 375 | 384 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | PRINTS | P450 superfamily signature | 384 | 395 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 377 | 386 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Hepe02g0052 | 445 | Pfam | Cytochrome P450 | 31 | 421 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | FunFam | Taxadiene 5-alpha hydroxylase | 1 | 435 | - | - | |
| Hepe02g0052 | 445 | PANTHER | CYTOCHROME P450 26 | 1 | 415 | - | GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER) | |
| Hepe02g0052 | 445 | Gene3D | Cytochrome P450 | 1 | 435 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Hepe02g0052 | 445 | CDD | CYP90-like | 29 | 434 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe01g1287 | Hepe-Chr1:78073209 | Hepe02g0052 | Hepe-Chr2:639312 | 6.72e-91 | dispersed | |
| Hepe02g0052 | Hepe-Chr2:639312 | Hepe07g0864 | Hepe-Chr7:10900098 | 6.30e-67 | dispersed | |
| Hepe02g0052 | Hepe-Chr2:639312 | Hepe02g0585 | Hepe-Chr2:5930217 | 1.52e-67 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g0052 | - | - | - | 0.0 |