Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0052 ATGGGTCTGCCTTGGATTGGCGAAACAATGGATTTTTACAGAGCCCAACGTAAGAACAGGTTGTTCGAGGATTTTGTTGGGCCTCGAGTTGCTAAATTTGGCAAAATTTTCAAAACAAATTTGATGGGTTCGGCAACTGTGGTCGTAAATGGAGCTGAAGCCAACAGGTTTTTCTTGTCGAATGAGTTTAAGTTGGTGGTTAGCTCGTGGCCATCGGCCTCTGTTCAGCTGATGGGTGAAGAATGCATCATGCAGAAGCAAGGTGAAAATCATCGATGTGTTCGTGGCCTTATTGGTGCTAGCCTTGCCACTGCTAGTCTTGAGGCTATGATGCCTAAATTGTGTACTACAATTCAGTCTTATTTGGATACCAAATGGCTTGGCCATGACACTATTGGTTTGTTTCACTCCGCGAAAGCATTGACGTTTACGATAGTGTTCGAGTGTTTGATGGGTATCGAAGTTGAGCCAGATGTGTTGGCGACGTTCGAGAGAGTTTTGGAAGGAGTTTTTGCACTACCGTTCAGGTTTCCCGGCTCAAAGTTTTCGAGAGCCAAGAAAGCGAGGTTGGAGATAGGGAAAATGCTAAGGGAAGTGGTGATAGAGAAAAGGAGGAGAATTGAAGGAAAGCTAGAAGAAGAGGAAGAATGTGGGTCATTGCTTTCAAGGATGGTGACAGCAATGATAAGAGGGGAGATTAGTGAAGTGGAAGTCATAGACAACGTGGTTTTGCTTGTTTTTGCAGCTCATGACACAACCTCCTTTGCCATTGCCATGACTTTCAAAATGTTGGCTCAGCATTCAGATTGCTACTCACTTCTTCTCCAGGAACATGCCGACATAGTGAGAAGCAAGGAACCAGGCCAGAATTTGACGATGGAAGATATAAAGAAGATGAAGTATACTTGGCAGGTTGCTCGTGAGAGCATTCGACTGTTTCCCCCTATATTCGGTTCTTTCAGGAAAGCGATTTCAGACATTGAATACGATGGATTCTTCATTCCCAAAGGATGGAAGGTCTTGTGGACGATGTACGGAACACATTACGAAGAAGAGTATTTTGAAGATCCATTGAGTTTCAAGCCAAGCAGATTTGAGGAACCTATTTCCCAGTATGTATATGTTCCATTTGGAGGAGGGCCAAGAGCTTGTGCAGGCTACCAGCTAGCCAAATTGAACATCCTCATCTTTATACACTTTGTTGTAACTCGTTATGATTGGAATTTAGTCCATCCAGATGAGCCAATCATAATGGATCCTCTCCCTTTCCCTGCTCATGGAATGCCAATTAAGATTTCTCCAAAATCAGAAGCTTGTCCCAATGAACAGCAAATGTAA 1338 43.57 MGLPWIGETMDFYRAQRKNRLFEDFVGPRVAKFGKIFKTNLMGSATVVVNGAEANRFFLSNEFKLVVSSWPSASVQLMGEECIMQKQGENHRCVRGLIGASLATASLEAMMPKLCTTIQSYLDTKWLGHDTIGLFHSAKALTFTIVFECLMGIEVEPDVLATFERVLEGVFALPFRFPGSKFSRAKKARLEIGKMLREVVIEKRRRIEGKLEEEEECGSLLSRMVTAMIRGEISEVEVIDNVVLLVFAAHDTTSFAIAMTFKMLAQHSDCYSLLLQEHADIVRSKEPGQNLTMEDIKKMKYTWQVARESIRLFPPIFGSFRKAISDIEYDGFFIPKGWKVLWTMYGTHYEEEYFEDPLSFKPSRFEEPISQYVYVPFGGGPRACAGYQLAKLNILIFIHFVVTRYDWNLVHPDEPIIMDPLPFPAHGMPIKISPKSEACPNEQQM 445
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 639312 641248 - Hsped.02g00520.1 Hepe02g0052 561553
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0052 445 SUPERFAMILY Cytochrome P450 2 434 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS E-class P450 group I signature 374 384 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS E-class P450 group I signature 237 254 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS E-class P450 group I signature 30 49 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS E-class P450 group I signature 384 407 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS E-class P450 group I signature 343 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS P450 superfamily signature 248 265 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS P450 superfamily signature 304 315 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS P450 superfamily signature 375 384 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 PRINTS P450 superfamily signature 384 395 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 377 386 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Hepe02g0052 445 Pfam Cytochrome P450 31 421 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 FunFam Taxadiene 5-alpha hydroxylase 1 435 - -
Hepe02g0052 445 PANTHER CYTOCHROME P450 26 1 415 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
Hepe02g0052 445 Gene3D Cytochrome P450 1 435 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0052 445 CDD CYP90-like 29 434 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1287 Hepe-Chr1:78073209 Hepe02g0052 Hepe-Chr2:639312 6.72e-91 dispersed
Hepe02g0052 Hepe-Chr2:639312 Hepe07g0864 Hepe-Chr7:10900098 6.30e-67 dispersed
Hepe02g0052 Hepe-Chr2:639312 Hepe02g0585 Hepe-Chr2:5930217 1.52e-67 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0052 - - - 0.0