Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0061 ATGTCAAATTCTTCGTCAATGGCGGCCAAATCTGTATCTCAAAATCATATTATCCTCTATTTAATTCTACTGCTCCAGTTTGCTACCTTCGGAATTGCAGCCACAGCCAAGCTTCATCGAGACGAAGTGAAAGCGTTGAAAGAGATCGAGAAGAAAATTGGGAAAAACGACTGGAATTTTACCGTAGATCCTTGCAGTGGAGAAGGAAATTGGCGCGTTGTTAATGGAAGAAAAGGTTTCGAAAGCTCCGTCACTTGTGATTGCTCTTTCAACCGTAACTCCACTTGCCGTATCGTCGCCGTAGCTTTGAAGGCCCAGAATCTTTCTGGCGTTGTGCCACCAGAGTTTTCCAAGCTTCGCTTCCTCAAACAGCTAGACCTCAGTCGAAATTGTCTCACTGGTTCTATTCCTTCACAATGGGCTACCATGCGATTGGTAGATCTCTCTATCATGGGAAACAAATTGTCTGGCCCATTCCCGAAAGTTCTTGCTAATATCACCACCTTCAGAAACCTGAGCATCGAAGGAAACCAATTTTCCGGCCGAATTCCACCAGAGGTCGGAAAACTAGTCAATTTGGAAAAATTTGTTCTGGCATCAAACGCTTTCACCGGAGAATTGCCTAGAGCACTAGCGAAGTTATCAAACTTAATTGATATGAGGATAAGTGACAACAACTTCTCTGGAAAGATACCTGAGTTCATTAGTAATTGGACACAGATTGAAAAACTGCATATACAAGGTTGCTCCCTCGAGGGGCCCATACCTTCAAGTATCTCCACCATGACAAGTTTAACTGATCTGAGAATATCTGACTTAAAAAGTGGAAGGTCTACTTTTCCACCGTTGAGCAAAATGGAATCCATGAAGACGCTGATACTGAGGAAGTGCTTAATTATTGGAGAAATCCCCAAATACATTGGGGACATAAAAAAATTGAAAAACTTAGACCTCAGCTACAATGACTTGACGGGCGAAGTTCCTGCATCTTTAGAACGACTGCAAAAAATAGATTACATATATTTGACAGGAAACAAGCTCAATGGAATTATTCCTGGTTGGGTTTTAGGAAGCAACAAGAATGTGGATCTTTCTAATAACAACTTCACTTGGGAAAGCTCGAGCCCAGCTGAGTGTCCTCGAGGGAGTGTAAATTTAGTAGAGAGTTACTCACCGTCTGCAGAAAAATTAGCTAGAATCCATCCCTGCCTAAAAAGGAACTTCCCGTGTTCTGCATCAAAGGAACAGCATCACTACTCTTTGCACATTAACTGTGGTGGTAAAGAAGCATTTGTAAGGGGTGAAAGGTATGAAGAAGATAGAGAAGGTGCTTCAATGTTTTATACTACTCAGAATTGGGCTTCTAGCAGCACGGGAAGCTTTATGGACAATGATGTCGATGCTGACAACTATATCATAACAAATACATCTGCTCTTTCAAATGTTTCTGTGACTGATTCAGAACTGTACACAAAAGCGAGAAATTCTCCTCAATCTCTTACATACTATGGGACCTGTCTCATAAATGGGAATTATACTGTTAAACTCCACTTTGCGGAGATCGTATTTATAAATGACAGTTCATTCAACAGCCTAGGGAAGCGAATTTTTGATGTGTACATCCAGGAAAAGCTGGTCCTGAAAGATTTTGATATAGAAAATGAAGCAGGGGGTACAGGCAAGCCTGTTATAAAAACATTTACTGCAGTTGTCACAAGTCATACATTGAAGATCCATTTCTACTGGGCTGGAAGAGGGACAACAGGAATCCCAGTTAGAGGAAATTATGGTCCTCTGATATCAGCTATTTCAGTAGATCCTAATTTTACACCTCCTAAGAACCATGTGAAGAAGGATCACACCATCATAATTATTGGGACAACAGCAGCAGCTTTTGTTCTTCTTCTTCTGGTGTTATGTATTATGAGGAGGAAGGGATGGCTGGGAGGCAAGGCATCCGTATATAAAGAGCTTAGAGGTATAGATCTGCAAACAGGATTATTTACAATAAGACAGATTAAAGCAGCCACGAAAAATTTTGATGCTGCTAACAAAGTTGGGGAAGGTGGTTTTGGTGCAGTTTACAAGGGTCACTTGTCAGATGGTACTATAATTGCAGTCAAGCAGCTGTCGTCAAAATCAAAGCAAGGAAATCGAGAATTTGTTAATGAAATAGGCATGATATCTGCACTGCAACACCCAAATCTTGTCAAGCTATATGGATGTTGTATTGATGGGAACCAACTGATGTTGGTTTATGAATACATGGAAAATAATTGCTTATCACGTGCCCTTTTTAGAAATGACCCAGCATCTAAATTGAGATTGGACTGGCCCACCAGGCAGAAAATTTGTCTGGGAATAGCTAGAGGTTTGGCCTATCTGCATGAAGAGTCAAGATTAAAAATCGTACATAGGGATATCAAGACAAGTAATGTGTTGCTTGATAAGGATTTCAGTTCTAAAATTTCTGATTTCGGTCTGGCTAAGCTTCATGAAGATGACAATACCCATATCAGCACCCGAGTTGCCGGAACCATTGGTTATATGGCACCGGAATATGCAATGCGTGGATGTTTGACCAGCAAAGCTGATGTTTATAGCTTTGGAGTTGTTGCCCTGGAAATTGTCAGTGGCAAAAGCAATACCAACTACAGGCCCAAGGAGGATTTTGTTTACCTTCTTGATTGGGCATCTGTTCTGCAAGAAAAAGGAAGCCTATTGGAGTTGGTAGACCCAGCCTTGGGCTCAAATTATTCATCAGAAGAAGCAATGGTGATGCTGAATGTGGCTCTCCTCTGCACCAACGCGTCTCCGACGCTGCGGCCTCTAATGTCCCAAGTGGTTAGCATGCTCGAAGGTCGAACTCCAGTGCAAGCACTTCTTTCTGATCCAGGATTTTCAGCCATTAGTTCCAAATTGAAGGCTCTCAGAAATCACTTTTGGCAACAATTGAGCCCCACACACAGTTTATCGTTGGACGATTTCCCTAGTGATTCCTTGAGTTCGAATGTGGAGGCAGAAGAGAACTACAATCTAGTAAGAACCCATTCTGTTAGATCTGATACATGA 3072 41.67 MSNSSSMAAKSVSQNHIILYLILLLQFATFGIAATAKLHRDEVKALKEIEKKIGKNDWNFTVDPCSGEGNWRVVNGRKGFESSVTCDCSFNRNSTCRIVAVALKAQNLSGVVPPEFSKLRFLKQLDLSRNCLTGSIPSQWATMRLVDLSIMGNKLSGPFPKVLANITTFRNLSIEGNQFSGRIPPEVGKLVNLEKFVLASNAFTGELPRALAKLSNLIDMRISDNNFSGKIPEFISNWTQIEKLHIQGCSLEGPIPSSISTMTSLTDLRISDLKSGRSTFPPLSKMESMKTLILRKCLIIGEIPKYIGDIKKLKNLDLSYNDLTGEVPASLERLQKIDYIYLTGNKLNGIIPGWVLGSNKNVDLSNNNFTWESSSPAECPRGSVNLVESYSPSAEKLARIHPCLKRNFPCSASKEQHHYSLHINCGGKEAFVRGERYEEDREGASMFYTTQNWASSSTGSFMDNDVDADNYIITNTSALSNVSVTDSELYTKARNSPQSLTYYGTCLINGNYTVKLHFAEIVFINDSSFNSLGKRIFDVYIQEKLVLKDFDIENEAGGTGKPVIKTFTAVVTSHTLKIHFYWAGRGTTGIPVRGNYGPLISAISVDPNFTPPKNHVKKDHTIIIIGTTAAAFVLLLLVLCIMRRKGWLGGKASVYKELRGIDLQTGLFTIRQIKAATKNFDAANKVGEGGFGAVYKGHLSDGTIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLVYEYMENNCLSRALFRNDPASKLRLDWPTRQKICLGIARGLAYLHEESRLKIVHRDIKTSNVLLDKDFSSKISDFGLAKLHEDDNTHISTRVAGTIGYMAPEYAMRGCLTSKADVYSFGVVALEIVSGKSNTNYRPKEDFVYLLDWASVLQEKGSLLELVDPALGSNYSSEEAMVMLNVALLCTNASPTLRPLMSQVVSMLEGRTPVQALLSDPGFSAISSKLKALRNHFWQQLSPTHSLSLDDFPSDSLSSNVEAEENYNLVRTHSVRSDT 1023
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 705993 718132 - Hsped.02g00610.1 Hepe02g0061 561562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0061 1023 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 967 IPR051824 -
Hepe02g0061 1023 Pfam Leucine Rich Repeat 216 238 IPR001611 GO:0005515(InterPro)
Hepe02g0061 1023 Pfam Leucine Rich Repeat 122 141 IPR001611 GO:0005515(InterPro)
Hepe02g0061 1023 Pfam Leucine Rich Repeat 312 334 IPR001611 GO:0005515(InterPro)
Hepe02g0061 1023 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 649 755 - -
Hepe02g0061 1023 CDD STKc_IRAK 686 954 - -
Hepe02g0061 1023 SUPERFAMILY L domain-like 88 370 - -
Hepe02g0061 1023 Gene3D Ribonuclease Inhibitor 237 380 IPR032675 -
Hepe02g0061 1023 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0061 1023 SUPERFAMILY Protein kinase-like (PK-like) 665 953 IPR011009 -
Hepe02g0061 1023 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 44 207 - -
Hepe02g0061 1023 Pfam Protein tyrosine and serine/threonine kinase 683 897 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0061 1023 Gene3D - 416 607 - -
Hepe02g0061 1023 Gene3D Transferase(Phosphotransferase) domain 1 756 960 - -
Hepe02g0061 1023 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 418 608 - -
Hepe02g0061 1023 Gene3D Ribonuclease Inhibitor 168 236 IPR032675 -
Hepe02g0061 1023 Gene3D Ribonuclease Inhibitor 41 167 IPR032675 -
Hepe02g0061 1023 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 238 385 - -
Hepe02g0061 1023 ProSiteProfiles Protein kinase domain profile. 680 962 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0061 1023 Gene3D Phosphorylase Kinase; domain 1 651 755 - -
Hepe02g0061 1023 FunFam Putative LRR receptor-like serine/threonine-protein kinase 756 964 - -
Hepe02g0061 1023 ProSitePatterns Protein kinases ATP-binding region signature. 686 708 IPR017441 GO:0005524(InterPro)
Hepe02g0061 1023 SMART serkin_6 680 950 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0061 1023 Pfam Malectin domain 420 603 IPR021720 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0061 Hepe-Chr2:705993 Hepe07g0962 Hepe-Chr7:12912952 2.82e-251 dispersed
Hepe02g0026 Hepe-Chr2:394914 Hepe02g0061 Hepe-Chr2:705993 1.87e-72 transposed
Hepe01g1457 Hepe-Chr1:79791418 Hepe02g0061 Hepe-Chr2:705993 2.33e-129 wgd
Hepe02g0061 Hepe-Chr2:705993 Hepe07g1830 Hepe-Chr7:61087546 1.79e-220 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72511 PF07714 PK_Tyr_Ser-Thr 1.40E-49 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0061 - - - 0.0