Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0073 ATGACACTCGATCATCACTCCCAACACTCCGATCAAGTCGACGATGATTCCGACCATCTCCATCCTACTCTTTCTACTGCGGTTGTCGTCAATGGAGCCGACTGCGAGAATGCCGGAGATGACCTCTTCGTCCCTCCTCTGAACTTCGCCGTCGTTGACAATGGCATTTTCCGCTCCGGCTTCCCCGACTCTTCCAACTTCTCCTTCTTGCAGACCTTAGGTCTTCGTTCGATTATATGTCTTTGTCCCGAGCCCTATCCTGAGGCGAGCATGGATTTTCTCAAGTCGAATGGAATCCGATTGTTTCAATTCGGGATTAAAGGTACTAAGGCTGGTTCAGACAAGGTTGATGCATATGTAAACTTGATTCTCGAGTGTATGAAGAATTTGGATATGAGCGCTGATCCAATGTACTATTTGGAGCCTTTTGTGAACATTCCAGACGATACAATTCGTGAAGCACTTAAAGTTATTCTTGATGTGAGGAATCGCCCTGTTTTAATCCATTGCAAACGAGGGAAGCACCGAACGGGTTGTGTTGTGGGATGCTTTAGAAAGTTGCAGAAATGGTGCCTATCTTCAGTGTTTGATGAGTACCAGAGGTTTGCCGCTGCCAAGGCAAGAGTTTCAGATCAGAGGTTCATTGAACTATTCGACGTTTCTGGTTTGAAGCATCTGCCATCATCATTTTCTTGTTCCAAAACATAA 708 45.62 MTLDHHSQHSDQVDDDSDHLHPTLSTAVVVNGADCENAGDDLFVPPLNFAVVDNGIFRSGFPDSSNFSFLQTLGLRSIICLCPEPYPEASMDFLKSNGIRLFQFGIKGTKAGSDKVDAYVNLILECMKNLDMSADPMYYLEPFVNIPDDTIREALKVILDVRNRPVLIHCKRGKHRTGCVVGCFRKLQKWCLSSVFDEYQRFAAAKARVSDQRFIELFDVSGLKHLPSSFSCSKT 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 865786 869393 + Hsped.02g00730.1 Hepe02g0073 561574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0073 235 Pfam Tyrosine phosphatase family 44 224 IPR004861 -
Hepe02g0073 235 MobiDBLite consensus disorder prediction 1 20 - -
Hepe02g0073 235 PRINTS Plant and fungal dual specificity phosphatase signature 99 113 IPR020428 GO:0016791(InterPro)
Hepe02g0073 235 PRINTS Plant and fungal dual specificity phosphatase signature 43 60 IPR020428 GO:0016791(InterPro)
Hepe02g0073 235 PRINTS Plant and fungal dual specificity phosphatase signature 146 160 IPR020428 GO:0016791(InterPro)
Hepe02g0073 235 PRINTS Plant and fungal dual specificity phosphatase signature 80 93 IPR020428 GO:0016791(InterPro)
Hepe02g0073 235 ProSiteProfiles Dual specificity protein phosphatase domain profile. 48 232 IPR020422 GO:0006470(InterPro)
Hepe02g0073 235 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 219 IPR029021 -
Hepe02g0073 235 Gene3D Protein tyrosine phosphatase superfamily 42 222 IPR029021 -
Hepe02g0073 235 PANTHER TYROSINE-PROTEIN PHOSPHATASE 11 229 - GO:0005737(PANTHER)|GO:0016791(PANTHER)
Hepe02g0073 235 ProSitePatterns Tyrosine specific protein phosphatases active site. 168 178 IPR016130 GO:0016311(InterPro)
Hepe02g0073 235 CDD PFA-DSP_Siw14 42 219 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0073 Hepe-Chr2:865786 Hepe09g1309 Hepe-Chr9:19073193 2.20e-67 dispersed
Hepe02g0073 Hepe-Chr2:865786 Hepe08g0587 Hepe-Chr8:5135298 3.69e-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0073 K18045 - csv:101209768 338.191