Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0107 ATGGAAGTTGAAGACGACGACTACCGAAGAAAAGAGCAACTCGTTCTCGTTGCAATTGTTGTACTTGCCTCTCTCGCTCTCGTTTCTCTTCTCGTCGCTTTCAGCTATTACTGCTATATCACCAATAAGGTCTCTAAGCGCCTCAAGATCCGCAAAAGAACTGATCTTGAAGACGGAGGTAGTTTTGAAAACGTTAAAGAATTTTCCACCGTGAAAGGCCTTCAAGTGTTCACCTTCAAGCAGCTACATTCAGCAACCGGTGGTTTTAGCAAGTCAAATGTGGTTGGGCATGGTAGCTTTGGGCATGTATATCGAGGAGTCCTCAGCGATGGGAGAAAAGTTGCAATTAAGCTTATGGATCAAGCGGGGAAGCAGGGAGAGGATGAGTTTAAAGTGGAGGTGGAACTGTTAAGTCGGCTTCATTCGCCGTATTTGTTGGCATTGCTTGGGTATTGCTCAGATAACAATCATAAATTGTTGGTATACGAGTTCATGGCGAATGGCGGTCTGCAAGAACATCTATACCCTGTTAGCAGTTCAAATTCCGTCAGCGTTAAGTTGGACTGGGAAACACGGCTGAGAGTTGCTCTTGAAGCTGCCAAAGGTTTGGAGTATTTACACGAACACGTAAGTCCCCCCGTTATTCATAGGGATTTCAAAAGCAGCAATGTCCTGTTGGACAAAAATCTTCATGCCAGGGTTTCTGATTTCGGATTGGCAAAGATCGGCTCAGACAAAGCTGGGGGCCACGTCTCCACTCGAGTATTGGGGACACAAGGATACGTTGCTCCTGAGTATGCACTAACGGGGCATTTAACAACAAAGTCAGATGTCTATAGTTATGGGGTTGTCCTCTTGGAGCTGCTAACAGGCAGAGTTCCAGTTGATATGAAGAGAACTCCTGGGGAAGCTTCCCTTGTTTCTTGGGCTTTGCCCAGGCTGACTGATAGGGAGAAAGTGATGTATATAATGGACCCTGCATTGGAGGGTCAGTACTCCATGAAGGATGTTGTTCAAGTGGCAGCAATCGCAGCAATGTGTGTTCAACCGGAGGCGGATTACAGGCCGCTGATGGCCGATGTTGTCCAGTCACTGGTTCCACTGGTGAGAAATTACAGGACAGCTTCAAAGATCGGTAGCAGTTCTAGTTCCAGCGCTACCAAGTCACCTACAGCACACGACAATGCTAGTTCGGGAGAGTGA 1203 47.05 MEVEDDDYRRKEQLVLVAIVVLASLALVSLLVAFSYYCYITNKVSKRLKIRKRTDLEDGGSFENVKEFSTVKGLQVFTFKQLHSATGGFSKSNVVGHGSFGHVYRGVLSDGRKVAIKLMDQAGKQGEDEFKVEVELLSRLHSPYLLALLGYCSDNNHKLLVYEFMANGGLQEHLYPVSSSNSVSVKLDWETRLRVALEAAKGLEYLHEHVSPPVIHRDFKSSNVLLDKNLHARVSDFGLAKIGSDKAGGHVSTRVLGTQGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMKRTPGEASLVSWALPRLTDREKVMYIMDPALEGQYSMKDVVQVAAIAAMCVQPEADYRPLMADVVQSLVPLVRNYRTASKIGSSSSSSATKSPTAHDNASSGE 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1276730 1281154 + Hsped.02g01070.1 Hepe02g0107 561608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0107 400 SUPERFAMILY Protein kinase-like (PK-like) 64 365 IPR011009 -
Hepe02g0107 400 CDD STKc_IRAK 95 368 - -
Hepe02g0107 400 MobiDBLite consensus disorder prediction 378 400 - -
Hepe02g0107 400 ProSiteProfiles Protein kinase domain profile. 89 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0107 400 ProSitePatterns Protein kinases ATP-binding region signature. 95 117 IPR017441 GO:0005524(InterPro)
Hepe02g0107 400 Pfam Protein tyrosine and serine/threonine kinase 92 365 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0107 400 FunFam Receptor-like serine/threonine-protein kinase ALE2 165 385 - -
Hepe02g0107 400 PANTHER OS01G0750732 PROTEIN 17 393 IPR050885 -
Hepe02g0107 400 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0107 400 FunFam Serine/threonine-protein kinase PBS1 57 164 - -
Hepe02g0107 400 Gene3D Transferase(Phosphotransferase) domain 1 165 388 - -
Hepe02g0107 400 Gene3D Phosphorylase Kinase; domain 1 52 164 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0107 Hepe-Chr2:1276730 Hepe02g1156 Hepe-Chr2:14349614 7.62e-101 dispersed
Hepe02g0506 Hepe-Chr2:5080427 Hepe02g0107 Hepe-Chr2:1276730 3.80e-40 dispersed
Hepe09g0555 Hepe-Chr9:5224606 Hepe02g0107 Hepe-Chr2:1276730 3.34e-47 dispersed
Hepe09g1833 Hepe-Chr9:58375293 Hepe02g0107 Hepe-Chr2:1276730 1.14e-136 transposed
Hepe02g0107 Hepe-Chr2:1276730 Hepe07g1849 Hepe-Chr7:61393411 3.03e-45 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72512 PF07714 PK_Tyr_Ser-Thr 7.30E-44 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0107 - - - 0.0