Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0116 | ATGGACCGCCGTGCTCGTACAAACCCATTTCTCTCCGAGCAAGAAGATCCCGAACCAACGTCGGACGACGGCTTGCCGGAGTCCCCCTCCGACGGCAATGACTCTAAACCCGCCGCCGGCACCCCGCCCAAAAAAAGTAGAAGGGGAGTGCAGAAAAGAGTGGTGTCCGTACCGATCGGCGACGTGGAGGGATCTAAGAGCAAAGGGGAAGCATATCCACCGTCCGATTCATGGGCATGGAGGAAATACGGCCAAAAGCCAATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGCTGCCCAGCAAGAAAGCAAGTAGAGAGAAGCCGTGTGGACCCCACCAAGCTCGTTATCACCTACGCTTTCGACCACAACCACCAACTCCCGGCCACCAAATCTCACCACCACCACCACCACAATTCCTCGCCGTCCTCCGCCGCGATCGCCGCCCCATCAGCAGCCGCCGACTCGTCCCCGGGGAGCACTACGACGTCGTCCTCCACTTCCTCCGGCGACCACATGAACGCCACCCCCTCTTCGCCGCAGCCGCCGACGGCGGTGTTCGCGAGTCAGCCGGAACTGGAACTCGGCGGCGACTCGATGATGATAAAACCGTGCATCGGTGATTTTGGATGGTTTGCTGACGTGGCGTACGATAGAATCCTGGAGGGCCCGCTTTTCGGGGGAGGCGATATGTTCGACGATGCCGATGTAATGGTTTTGTCGACGAGAGGAGATGACGAGGACGAGTCGTTATTTGCGGATCTTGGGGAATTGCCCGAAGGCTCGGTGGTTTTCGGCCGCCGGAGATCGGTCCAACCGGACGGGCCGAGCCGGACTTGTGGCAGAGTTTTAAACTGCTAG | 882 | 58.84 | MDRRARTNPFLSEQEDPEPTSDDGLPESPSDGNDSKPAAGTPPKKSRRGVQKRVVSVPIGDVEGSKSKGEAYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPTKLVITYAFDHNHQLPATKSHHHHHHNSSPSSAAIAAPSAAADSSPGSTTTSSSTSSGDHMNATPSSPQPPTAVFASQPELELGGDSMMIKPCIGDFGWFADVAYDRILEGPLFGGGDMFDDADVMVLSTRGDDEDESLFADLGELPEGSVVFGRRRSVQPDGPSRTCGRVLNC | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1353391 | 1356330 | + | Hsped.02g01160.1 | Hepe02g0116 | 561617 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0116 | 293 | Gene3D | WRKY domain | 62 | 136 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0116 | 293 | MobiDBLite | consensus disorder prediction | 136 | 193 | - | - | |
Hepe02g0116 | 293 | SUPERFAMILY | WRKY DNA-binding domain | 70 | 135 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0116 | 293 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 31 | 195 | IPR044810 | GO:0000976(PANTHER)|GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Hepe02g0116 | 293 | FunFam | WRKY transcription factor 65 | 61 | 135 | - | - | |
Hepe02g0116 | 293 | SMART | WRKY_cls | 74 | 134 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0116 | 293 | Pfam | WRKY DNA -binding domain | 76 | 133 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0116 | 293 | MobiDBLite | consensus disorder prediction | 1 | 114 | - | - | |
Hepe02g0116 | 293 | MobiDBLite | consensus disorder prediction | 161 | 193 | - | - | |
Hepe02g0116 | 293 | ProSiteProfiles | WRKY domain profile. | 75 | 135 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0116 | Hepe-Chr2:1353391 | Hepe04g2070 | Hepe-Chr4:75521484 | 3.93e-33 | dispersed | |
Hepe02g0116 | Hepe-Chr2:1353391 | Hepe07g1840 | Hepe-Chr7:61214847 | 2.61e-49 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54925 | PF03106 | WRKY | 1.10E-24 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0116 | - | - | - | 0.0 |