Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0122 ATGAAGCGTTATGTTTACATCAATGATGATGAACCATCAAATGATCTTTATTGCGATAACCGCATTTCGAACCGGAAATACACATTATTGAACTTTCTCCCCAAAAATTTATGGGAACAGTTCAGCCGCTTCATGAACCAATACTTTTTGTTAATTGCTTGCCTACAGTTATGGCCGCTTATAACTCCAGTAAATCCCGCCAGTACATGGGGTCCACTTATCTTCATTTTTGCTGTGTCTGCAACAAAAGAGGCATGGGATGATTACAATAGATATTTATCAGATAAAAAAGCAAATGAGAAAGAAGTTTGGGTTGTGAAGCAGGGTACCAGAAAAATTATTCAAGCACAAGATATTCATGTTGGTAATTTAGTATGGCTCAGGGAGAATGATGAAGTGCCTTCTGATCTTGTTTTGATTGGTACCTCTGATCCTCAAGGAATTTGCTATATAGAGACATCTGCCCTTGATGGAGAAACTGACTTGAAGACAAGGGTCATACCCTCAGCTTGCATGGGAATAGATTTTGATCTATTAAACAAGATCAAGGGAGTTATAGAATGCCCTAAACCAGATAAGGATATTAGAAGATTTGATGCAAACATTCGGTTATTTCCTCCCTTCATTGACAATGATGTGTGCTCTTTGACCATAAAAAACACAATTCTTCAGTCATGTTACTTGCGGAACACAGAGTGGGTCTGTGGAGTAGCCGTCTACACAGGCAATGAAACCAAGCTTGGAATGAGCAGGGGTGTCCCAGAACCAAAACTTACAGCTATGGATGCAATGATTGACAAGTTAACTGGTGCTATATTTGTTTTTCAACTTGTGGTGGTTGTTGTTTTAGGTATAGCTGGAAATGTGTGGAAGGATTCTGAAGCCAGAAAGCTATGGTATGTGCAACATCCAGAGGAAGGTCCATGGTATGAGCTGCTGGTCATCCCTCTTCGGTTTGAGCTTCTTTGTTCAATCATGATACCCATTTCCATTAAGGTGTCTCTGGATCTTGTCAAGAGCTTATATGCAAAATTTATTGATTGGGACTATGATATGATTGACCGTGAGACTGGTATTCCTTCCCATGCTGCTAATACAGCAATAAGTGAGGACCTGGGACAAGTCGAATACATTTTGACGGATAAAACCGGTACCCTCACTGAAAATAAGATGATCTTCAGGAGATGTTGTATCAGTGGCATTTTTTATGGAAATGAAAATGGAGATGCCTTGAAAGATAAAAAGTTGCTCAATGCAATTGCAAGCAGCTCTCCGGATGTTATAAGATTTCTCACAATTATGGCAATATGTAATACAGTGGTGCCTACAAAAAGCAAAAGTGGAAATATCTTGTACAAGGCACAGTCACAGGATGAGGATGCTCTCGTGAATGCTGCTGCTTATTTGCATATGGTATTTGTCAATAAGAGTGCTAACATTCTTGAAATTCGGTTTAATGGAATGCTAAATAGATATGAGCTCCTAGATACTCTGGAGTTCACATCTGAACGAAAAAGAATGTCTGTGGTTGTTAAAGATTGTCAGACAGGGAAGATTGTCCTCCTGTCAAAAGGAGCAGATGAATCTATACTTCCTTATGCTTATGCTGGCCAGCAAACAAGAACATTTATTGAAGCCGTGGATCAATATGCACAACTGGGGCTCCGCACATTATGTCTGGCTTGGCGTGAACTAGAGGAAGAGGAGTATCGAGAATGGGCTTTTATGTTTAAGGAGGCTAATAGCACATTGGTTGACAGGGAGTGGAGGTTAGCTGAAGTTTGCCAAAGATTAGAGCGCAATTTTGAAGTCCTTGGAGTTACTGCTATAGAAGATAGGCTACAGGATGGAGTCCCTGAAACAATTGAAACATTAAGAAGAGCAGGAATACATTTCTGGATGCTGACTGGAGACAAGCAGAACACTGCGATCCAGATAGCTCTTCTATGCAACTTTATTTCACCAGAGCCCAAAGGACAGTTGTTGTTAATTGATGGAAAAACGGAGGATGAAGTTTGTAGAAGTTTGGAGAGAGTTGTTCTAACTATGAAGACGACAACCTCAGAACCCAAGGATGTTGCTTTCGTTGTTGATGGCTGGGCTCTTGAAATTGCTCTCAAGAATTATCGTAGGGCTTTCACTGAATTAGCAATACTATCAAGAACTGCAATCTGTTGTCGTGTGACGCCATCACAGAAGGCTCAGCTCGTGGAACTCTTAAAATCATGTGATTATAGAACACTGGCAATTGGAGATGGTGGGAATGATGTGAGGATGATACAACAAGCTGACATTGGAGTTGGCATTAGTGGAAGAGAAGGACTGCAGGCAGCTAGGGCAGCTGATTATAGTATTGGAAAGTTCAGGTTTCTGAAAAGATTAATTCTAGTTCATGGACGATACTCATACAACCGTACAGCATTTTTGTCACAATATTCATTCTATAAATCCTTATTGATATGTTTTATCCAGATCTCTTTCTCTTTCATATCAGGTGTCTCTGGGACCAGTCTATTCAATTCTGTTAGCTTGATGGCTTACAATGTTTTCTACACCAGTATTCCTGTATTAGTTAGCGTCCTTGACAAAGATCTCAGCGAAGAAACAGTGATGCAACATCCTCAGATTTTATTTTACTGCCAAGCTGGGAGGCTTTTAAATCCCAGCACATTTGCCGGATGGTTTGGTCGATCTCTATTTCATGCTGTCGTCGTATTTGTAATTAGCATACATGCCTACGCTAATGAAAAGAGTGAAATGGTGGAGGTTTCAATGGTGGCACTTTCTGGATGCATTTGGTTACAGGCTTTTGTAGTGACTTTGGAGACCAATACATTTACAATGTTGCAACATATGGCAATATGGGGGAATTTAGCTGCTTTCTACGTAATCAATTGGATCTTCAGTGCCATTCCTTCATCTGGGATGTATACAATAATGTTCCGCTTATGCGGACAGCCATCTTATTGGATAACCATATTTCTAATTATAGGCGTGGGAATGGGGCCACTACTAGCAATAAAGTACTTCAGATACACATACAGGCCAAGCAAAATAAACACTCTTCAGCAGGCTGAGCGTTTGGGTGGGCCAATATTATCACTGAAAAACATCGAGCATCAGCCACGGCCCATTGAGAAAGAAGTTTCTCCAGTCTCAATAACTCACCATCAGCCCAAAAACAGAAATACTGTTTACGAACCACTTTTATCAGACTCTCCAACCACAGCCACTAGAAGATCTCTTCCATCTGGTTCCTCCTTTGATTTCTTTCAGACACCTTCCAGTTATTCAAGAAATAAGGATAACTGA 3312 40.43 MKRYVYINDDEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIHVGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLNKIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCSLTIKNTILQSCYLRNTEWVCGVAVYTGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWYVQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYDMIDRETGIPSHAANTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGIFYGNENGDALKDKKLLNAIASSSPDVIRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSANILEIRFNGMLNRYELLDTLEFTSERKRMSVVVKDCQTGKIVLLSKGADESILPYAYAGQQTRTFIEAVDQYAQLGLRTLCLAWRELEEEEYREWAFMFKEANSTLVDREWRLAEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGIHFWMLTGDKQNTAIQIALLCNFISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNTFTMLQHMAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIIGVGMGPLLAIKYFRYTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPVSITHHQPKNRNTVYEPLLSDSPTTATRRSLPSGSSFDFFQTPSSYSRNKDN 1103
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1401928 1413407 + Hsped.02g01220.1 Hepe02g0122 561623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0122 1103 NCBIfam phospholipid-translocating P-type ATPase 423 1023 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Hepe02g0122 1103 Pfam Phospholipid-translocating ATPase N-terminal 5 70 IPR032631 -
Hepe02g0122 1103 SUPERFAMILY HAD-like 374 805 IPR036412 -
Hepe02g0122 1103 Pfam Phospholipid-translocating P-type ATPase C-terminal 778 1017 IPR032630 -
Hepe02g0122 1103 SFLD p-type atpase 364 801 IPR044492 -
Hepe02g0122 1103 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 1016 IPR023298 -
Hepe02g0122 1103 NCBIfam HAD-IC family P-type ATPase 717 834 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Hepe02g0122 1103 Pfam Cation transport ATPase (P-type) 435 532 - -
Hepe02g0122 1103 ProSitePatterns E1-E2 ATPases phosphorylation site. 381 387 IPR018303 -
Hepe02g0122 1103 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 1023 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Hepe02g0122 1103 Gene3D - 446 581 IPR023299 GO:0000166(InterPro)
Hepe02g0122 1103 Gene3D - 602 790 IPR023214 -
Hepe02g0122 1103 MobiDBLite consensus disorder prediction 1063 1103 - -
Hepe02g0122 1103 FunFam Phospholipid-transporting ATPase 75 251 - -
Hepe02g0122 1103 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 386 573 IPR023299 GO:0000166(InterPro)
Hepe02g0122 1103 Pfam E1-E2 ATPase 99 295 - -
Hepe02g0122 1103 FunFam Phospholipid-transporting ATPase 602 789 - -
Hepe02g0122 1103 SFLD Haloacid Dehalogenase 364 801 - -
Hepe02g0122 1103 Gene3D - 75 251 - -
Hepe02g0122 1103 PRINTS P-type cation-transporting ATPase superfamily signature 379 393 - -
Hepe02g0122 1103 PRINTS P-type cation-transporting ATPase superfamily signature 152 166 - -
Hepe02g0122 1103 PRINTS P-type cation-transporting ATPase superfamily signature 750 769 - -
Hepe02g0122 1103 PRINTS P-type cation-transporting ATPase superfamily signature 628 638 - -
Hepe02g0122 1103 FunFam Phospholipid-transporting ATPase 449 592 - -
Hepe02g0122 1103 SUPERFAMILY Calcium ATPase, transduction domain A 100 248 IPR008250 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0122 Hepe-Chr2:1401928 Hepe04g0680 Hepe-Chr4:60310987 1.27e-173 dispersed
Hepe02g0122 Hepe-Chr2:1401928 Hepe02g2152 Hepe-Chr2:58261726 4.52e-155 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0122 K01530 - csv:101210900 2091.23