Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0124 ATGACCACCGGAAGAGAAATCCTCCACAAGATGAAGGTGAAGGTAGGATTTTGTTCGTCGGCAGCAGATGATTATACAGATGGGAAAGGGAAAGGCAAAGTGATGAGCACAAAGAATAATCATAGTAATATTATAAGTCATGGGAGTCATTTGGTGAAGGGAAAAACCAATCATCCAATGGAAGATTATTTAGTTTCAGATTTCAAGACAGTCAAAGAACATGAATTGGGTTTGTTTGCCATTTTTGATGGACATTTGGGACATGATGTTGCTAATTTCTTGCAAAATCATCTCTTTGATAACATCCTTAAAGAGGGTGATTTCTGGAGCGAAACAAGAAGAGCAATAAAAAGAGCATACAAGAAAACAGACGAAGAAATATTGGATAAAGTGAAGGAACTTGGAAAAGGAGGATCAACGGCTGTAACTGCGATTTTGATCGACGGTCATAAACTCGTGGTTGCCAACGTTGGAGATTCCAGAGCCGTTTTGTGCAAAAACGGCGTCGCCGAGCAACTTTCCGTCGATCACGAACCCACTAGAGAAAAACGGGAAATTGAAAGCCGTGGTGGTTTTGTGTCAAATATTCCAGGGGATGTTCCACGTGTCGACGGACAATTGGCTGTGGCTAGAGCATTCGGAGATAAGAGCTTAAAACTCCACCTCAGCTCAGAACCTGACGTGGAAGTCAAAACGGTGGATGAAACTACAGAGTTCATGATTTTGGCTAGTGATGGCATTTGGAAGGTAATGACAAATAGTGAGGCCGTCGAATCTATTAGACACATAAAAGACGCGAACTTAGCTGCCAAACGACTTATCGAGGAAGCAGTATCTAGAAAAAGCAGGGACGACATATCGTGCATCGTTGTTAGATTTCATTGA 885 41.92 MTTGREILHKMKVKVGFCSSAADDYTDGKGKGKVMSTKNNHSNIISHGSHLVKGKTNHPMEDYLVSDFKTVKEHELGLFAIFDGHLGHDVANFLQNHLFDNILKEGDFWSETRRAIKRAYKKTDEEILDKVKELGKGGSTAVTAILIDGHKLVVANVGDSRAVLCKNGVAEQLSVDHEPTREKREIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKLHLSSEPDVEVKTVDETTEFMILASDGIWKVMTNSEAVESIRHIKDANLAAKRLIEEAVSRKSRDDISCIVVRFH 294
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1422576 1425729 - Hsped.02g01240.1 Hepe02g0124 561625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0124 294 ProSiteProfiles PPM-type phosphatase domain profile. 46 293 IPR001932 -
Hepe02g0124 294 SMART PP2C_SIG_2 51 293 IPR001932 -
Hepe02g0124 294 PANTHER PROTEIN PHOSPHATASE 40 291 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g0124 294 Pfam Protein phosphatase 2C 56 286 IPR001932 -
Hepe02g0124 294 Gene3D - 40 294 IPR036457 -
Hepe02g0124 294 SMART PP2C_4 36 291 IPR001932 -
Hepe02g0124 294 SUPERFAMILY PP2C-like 40 294 IPR036457 -
Hepe02g0124 294 CDD PP2Cc 45 293 IPR001932 -
Hepe02g0124 294 FunFam Probable protein phosphatase 2C 39 37 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0124 Hepe-Chr2:1422576 Hepe02g2750 Hepe-Chr2:76016297 2.91e-56 dispersed
Hepe01g1939 Hepe-Chr1:84250824 Hepe02g0124 Hepe-Chr2:1422576 5.91e-62 transposed
Hepe01g2126 Hepe-Chr1:85895053 Hepe02g0124 Hepe-Chr2:1422576 6.38e-110 transposed
Hepe04g2057 Hepe-Chr4:75410809 Hepe02g0124 Hepe-Chr2:1422576 3.07e-96 transposed
Hepe07g0339 Hepe-Chr7:3402805 Hepe02g0124 Hepe-Chr2:1422576 2.15e-104 transposed
Hepe01g1396 Hepe-Chr1:79193775 Hepe02g0124 Hepe-Chr2:1422576 1.81e-134 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0124 K17506 - csv:101211399 502.671