Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0128 ATGGCAGATTCATCACACCGTTCGTCGGTGTTTCAAAAGATGTATGGCCATTCTTACCTCACTTCTAGGATTTCCCCTGGCTTGCAGACCACACGTTACAGTACAACAGGTGTATATGCTAATGGAGTTTTGGAGAATCCCTTAAAGACAGCTTATCATGGGACTGGCTTGGCTGGAGTTTCACCTACTTCTTTTGTTGTACAAGCTCCTTCTGAAAAAGGTGCAGCTGGCTTTGCTGTGGATTTTCTTATGGGAGGAGTATCTGCTGCTGTTTCTAAAACAGCTGCTGCTCCAATTGAGCGTGTCAAACTGCTGATTCAAAATCAGGATGAGATGCTTAAAACTGGTAGGCTATCTGCGCCATACAAAGGAATTAGTGACTGCTTTGCCCGAACAATTAAAGATGAAGGAGTCATTGCCCTGTGGAGGGGGAACACCGCAAATGTTATCAGATACTTCCCCACACAAGCTTTGAATTTTGCCTTCAAGGATTACTTCAAGAGGCTGTTCAACTTCAAAAAAGACAGAGATGGTTACTGGAAATGGTTTGCAGGGAATTTGGCCTCTGGTGGTGCTGCTGGTGCTTCATCTCTTTTATTTGTTTATTCCCTTGATTATGCTAGAACTCGTCTGGCCAATGATGCTAAGGCTGCTAAAGGGGGTGGTGACAGGCAGTTTAATGGTCTTGTTGATGTTTACAAGAAAACCCTTAAATCTGATGGCATTGCTGGGCTGTATCGTGGATTTAACATCTCTTGTGTTGGAATTATTGTGTATCGTGGTCTTTACTTTGGAATGTATGATTCGATGAAGCCCGTGGTTCTGGTTGGCGACTTACAGGATAGTTTCCTTGCTAGTTTCTTGCTTGGATGGTGTATCACAATAGGAGCTGGTTTGGCTTCTTACCCCATTGATACCGTCCGAAGAAGAATGATGATGACCTCAGGCGAAGCAGTCAAGTACAATAGCTCCTTGGACGCATTCAAACAGATCGTTAAGAATGAGGGTACTAAATCTCTCTTCAAGGGTGCTGGGGCAAACATTTTGCGTGCGGTTGCTGGTGCTGGTGTGTTGGCTGGGTATGACAAGCTTCAGCTCATTCTTCTTGGCAAGAAATATGGTTCCGGTGGTGGCGGTTAA 1140 44.65 MADSSHRSSVFQKMYGHSYLTSRISPGLQTTRYSTTGVYANGVLENPLKTAYHGTGLAGVSPTSFVVQAPSEKGAAGFAVDFLMGGVSAAVSKTAAAPIERVKLLIQNQDEMLKTGRLSAPYKGISDCFARTIKDEGVIALWRGNTANVIRYFPTQALNFAFKDYFKRLFNFKKDRDGYWKWFAGNLASGGAAGASSLLFVYSLDYARTRLANDAKAAKGGGDRQFNGLVDVYKKTLKSDGIAGLYRGFNISCVGIIVYRGLYFGMYDSMKPVVLVGDLQDSFLASFLLGWCITIGAGLASYPIDTVRRRMMMTSGEAVKYNSSLDAFKQIVKNEGTKSLFKGAGANILRAVAGAGVLAGYDKLQLILLGKKYGSGGGG 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1451157 1453761 + Hsped.02g01280.1 Hepe02g0128 561629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 81 94 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 290 312 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 94 108 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 246 264 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PRINTS Mitochondrial carrier protein signature 144 164 IPR002067 GO:0055085(InterPro)
Hepe02g0128 379 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 73 375 IPR002113 GO:0005471(PANTHER)|GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 285 367 IPR018108 -
Hepe02g0128 379 SUPERFAMILY Mitochondrial carrier 77 363 IPR023395 -
Hepe02g0128 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 76 169 IPR018108 -
Hepe02g0128 379 FunFam ADP,ATP carrier protein, mitochondrial 79 374 - -
Hepe02g0128 379 Gene3D Mitochondrial carrier domain 79 374 IPR023395 -
Hepe02g0128 379 Pfam Mitochondrial carrier protein 77 173 IPR018108 -
Hepe02g0128 379 Pfam Mitochondrial carrier protein 281 371 IPR018108 -
Hepe02g0128 379 Pfam Mitochondrial carrier protein 181 273 IPR018108 -
Hepe02g0128 379 PRINTS Adenine nucleotide translocator signature 155 167 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 PRINTS Adenine nucleotide translocator signature 181 194 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 PRINTS Adenine nucleotide translocator signature 286 302 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 PRINTS Adenine nucleotide translocator signature 122 143 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 PRINTS Adenine nucleotide translocator signature 78 90 IPR002113 GO:0005471(InterPro)|GO:0005743(InterPro)|GO:0140021(InterPro)|GO:1990544(InterPro)
Hepe02g0128 379 ProSiteProfiles Solute carrier (Solcar) repeat profile. 181 273 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0128 Hepe-Chr2:1451157 Hepe04g1378 Hepe-Chr4:69455331 3.59e-194 dispersed
Hepe02g0128 Hepe-Chr2:1451157 Hepe08g1397 Hepe-Chr8:16479083 3.08e-61 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0128 K05863 - csv:101212128 658.677