Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0152 ATGGGTGGTTGTGTCTCTACAAGCAGCCACAGTACGTGTAGTAGCCAGAGCAATGGAGAATCAGTTTCTTCCTCATGTATGGGAATTGGATTTCGAGGTCGAAAACGAACGAAAAGAACGTTCTCCGACCATGTTTATGCTCTTCAGAATCTTCCTTCAGCTCCCAACAGGATCTTCATGAATGGAAAAAGTCGTTCTTCTTGCATTTTCACGCAACAAGGTCGCAAGGGCATAAATCAGGATGCCATGGTTGTGTGGGAAGATTTCATGTCGGAGGACACGATCTTTTGCGGTGTATTCGATGGTCATGGACCTTACGGTCATCTCGTTGCTCGAAAAGTGAGGGATACATTGCCTATAAAGTTGCTGTCATTCTTCCAGTCTCCTCAGTTGAAGCAAAATGAGTCTGGTAAAACCTGTTTCCAGAGGAATTTGAAGACACCTCCAGATTGTGAAGATTCTGAGAAGGATGGTTTTGTAGAGGACTCGCAGAATTCGGCATGGAGAGACGCATTTTTGAACTCGTATAAAGCTATGGATAAGGAGTTGAGATCACATCCTAATCTTGACTGCTTTTGTAGTGGTAGTACTGCAGTCACCATAGTTAAACAGGGGTCAAATCTCTTCATGGGGTATATAGGGGACTCTCGAGCAATCCTTGCTTCGAAGGACACCAACGATTCCACTGTGGCGGTCCAATTAACCGTGGATCTTAAGCCAGATTTGCCGAGAGAAGCTGAAAGAATCAAAAGGTGTAAAGGTAGGGTCTTTGCATTGCAAGATGAGCCTGAAGTGCCTAGGGTATGGTTACCTTTTGACGATGCGCCCGGTTTAGCAATGGCTCGAGCATTTGGCGATTTCTGCTTGAAAGAATATGGAGTTATCTCTATACCTGAGTTCTCTCATCGAACCCTCACCGACGCTGATCAGTTCGTCGTTCTTGCATCAGATGGGGTATGGGATGTGCTGAGTAATGAAGAGGTAGTTGACATAGTGTCCTCGGCCCCAACTCGCTCTTCTGCTGCGAGGTCTGTGGTTGACTCTGCTGCTCGTGAATGGAAACTCAAATACCCTACCTCAAAAATGGATGACTGCGCTGTCGTCTGCTTATTTTTGGACCGGAGGATGGACTCCGAATCCGACTGTGACGAACAAGCCTTCTCATCTGCAACATTGCGGAGTAATCATTCGGGTACTGCTGTTGAATCCGATGATGGTCAGAGGTCTGAGCCATGTTTGCAAAGGAATAACACTGTCAGATCATCTGAAGAAACCAATACTTATGGGGGATTAACCGTCGACGACGGGGAGATTGGTGATGTTGTACCTGCTGAAGATCAAAACTGGTCGGGTTTGGAAGGAGTCACTCGAGTGAACTCGCTTGTTCAACTTCCTAGATTTTCCGAGGAAAGACCAGTGTTGTAG 1425 46.32 MGGCVSTSSHSTCSSQSNGESVSSSCMGIGFRGRKRTKRTFSDHVYALQNLPSAPNRIFMNGKSRSSCIFTQQGRKGINQDAMVVWEDFMSEDTIFCGVFDGHGPYGHLVARKVRDTLPIKLLSFFQSPQLKQNESGKTCFQRNLKTPPDCEDSEKDGFVEDSQNSAWRDAFLNSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAILASKDTNDSTVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRTLTDADQFVVLASDGVWDVLSNEEVVDIVSSAPTRSSAARSVVDSAAREWKLKYPTSKMDDCAVVCLFLDRRMDSESDCDEQAFSSATLRSNHSGTAVESDDGQRSEPCLQRNNTVRSSEETNTYGGLTVDDGEIGDVVPAEDQNWSGLEGVTRVNSLVQLPRFSEERPVL 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1671125 1674209 + Hsped.02g01520.1 Hepe02g0152 561653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0152 474 ProSiteProfiles PPM-type phosphatase domain profile. 66 372 IPR001932 -
Hepe02g0152 474 Gene3D - 57 375 IPR036457 -
Hepe02g0152 474 FunFam probable protein phosphatase 2C 52 57 375 - -
Hepe02g0152 474 Pfam Protein phosphatase 2C 167 350 IPR001932 -
Hepe02g0152 474 MobiDBLite consensus disorder prediction 393 429 - -
Hepe02g0152 474 MobiDBLite consensus disorder prediction 393 438 - -
Hepe02g0152 474 SUPERFAMILY PP2C-like 56 373 IPR036457 -
Hepe02g0152 474 MobiDBLite consensus disorder prediction 1 25 - -
Hepe02g0152 474 PANTHER PROTEIN PHOSPHATASE 67 371 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g0152 474 CDD PP2Cc 65 372 IPR001932 -
Hepe02g0152 474 SMART PP2C_4 55 370 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0152 Hepe-Chr2:1671125 Hepe06g1222 Hepe-Chr6:61844327 3.11e-146 dispersed
Hepe01g1867 Hepe-Chr1:83600673 Hepe02g0152 Hepe-Chr2:1671125 1.05e-92 transposed
Hepe04g0713 Hepe-Chr4:60979754 Hepe02g0152 Hepe-Chr2:1671125 4.87e-104 transposed
Hepe02g0152 Hepe-Chr2:1671125 Hepe08g0522 Hepe-Chr8:4577549 8.80e-229 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0152 - - - 0.0