Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0159 ATGGGTTGGAAGAGATCTTCGAGGAATTGCAATTTGAGGATCTGTGTGCAGGTTTTAGTTGGATTCGTGATCTGTGCAGCACAAGTTCTTTTCGGAATTACGAATCCAGGCGATTTTGCTGCTATCAGTAGCTTACATACCGCACTGGGACTCCCCAATCTTCCTGGATGGGGTATTGGGCAAGACCCATGTGGAGATGCATGGCAGGGTATCGTATGTAATGATTCAAACATCATTAAAATAGTTATTAATGCTGCTAATTTGGGAGGTGGACTGGGTGACAACTTGGGAATGTTCTCTTCAATCCAAACAATTGATTTTAGCAACAATAACATAGGGGGAAGTATTCCATCCAGTTTACCCGTTACCATGCAGAACCTTTTTCTTTCAGCTAATGAGTTCACTGGAAGCATTCCGAGTTCATTATCATCTTTAGTTCAACTGGCAGCCATGTCGGTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTTGAAACCATTACTCAATTGATCAATTTTGACTTATCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTATCAGGGACCCTTGATGTTCTACAAGACCTTCCACTAAAAGATTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTCCTGAGTATCCCTAATTTTAGAAAGGATGGAAACCCATTTAATTCTTCTGTTTCTCCAACGCCTCCTCCTTCTGTATCTCCACCATCAAAGCCGGCACCAGCACCTACAGTTTCTGGAGCACCAGCACCGCCAGTTTCTGGAGCACCGCCATCTTCTCAACAAAAACCTAGGAAACAGGCTGATGGACCATCCGCACCTGAGGAATCCAGTACTGGAAAAAATAAGAAACATACTAAAAGGGTTGTTTTGATAACAATTGCAGTGGTATTGTCACTCATAATTTTGGTCTTGGCATGTGTGCTTTTTATGCCAAGGTGCAGAAGGAGAGCAGTTGATCGTATTTCCAAGCCACATCAGATAGGTGCTTATAGGGGTGAGAGAGAGAATGCTGGAAATGAGGGATCCATGCACCATACAATTGATCAGATACCTAAAGTTCCAAAAGAGGCAGTTGTAGGGCCGAAGCAGGAAACTCAAACAGAGGCTCAGAAGGTTCCAAAAGCTCATGAAGAGAGAGAGAGAAACATGCCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATGTGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCTCCACCACCTCCTGTTGAAGAGGTCACTGCAGTGCCCATTGTTCCAGCCGAAGTTCCACCCTTGAGGCCTCCCACCAAACATAGAGTTACCTCAACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGGAGTGTTTATCGGGCACAGCTCCCCAGTGGGAAGCTACTGGCCGTCAAGAAACTGGATAAAAGAGCATTCAGTCAGCAAAAGGATGATGAATTCCTTGAGTTAGTGAATAATATCGATAGAATCCGGCATGCTAATGTGGTAGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGCAGTGGTGGAACACTGCAGGATGCACTGCACTCAGACACAGAGTTCAGAAAGAATCTTTCTTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCACCTGTTATTCATAGGAATTTCAAGTCCTCAAATGTCCTACTTGATGAAGATCTTTCAGTGCGTCTTTCAGAATGTGGTCTGGCTTCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCAGGTCAGCTTCTAACAGCATATGGTTACGGAGCGCCAGAGTTTGAATCAGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGATAGAACAAGGACCCGGGGTGAGCAGTTTCTAGTCAGATGGGCGATTCCGCAGCTTCACGACATAGAGGCATTGACGAGCATGGTTGATCCTTCGCTCAATGGTCGATACCCTGCTAAATCCTTGTCATACTTTGCCGATGTCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCAACGGTCGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACAAGGCAGTGGTTCAAGTGAAGATTGA 2358 44.83 MGWKRSSRNCNLRICVQVLVGFVICAAQVLFGITNPGDFAAISSLHTALGLPNLPGWGIGQDPCGDAWQGIVCNDSNIIKIVINAANLGGGLGDNLGMFSSIQTIDFSNNNIGGSIPSSLPVTMQNLFLSANEFTGSIPSSLSSLVQLAAMSVNDNKLSGQIPDSFETITQLINFDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTPPPSVSPPSKPAPAPTVSGAPAPPVSGAPPSSQQKPRKQADGPSAPEESSTGKNKKHTKRVVLITIAVVLSLIILVLACVLFMPRCRRRAVDRISKPHQIGAYRGERENAGNEGSMHHTIDQIPKVPKEAVVGPKQETQTEAQKVPKAHEERERNMPRMSAIPKKDHHEVDVSALDVYLMPPPPPPPPPPPPPPVEEVTAVPIVPAEVPPLRPPTKHRVTSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDTEFRKNLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSSNVLLDEDLSVRLSECGLASLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGRYPAKSLSYFADVISKCVQSEPEFRPPMSTVVQDLLNMIRREPQGSGSSED 785
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1705438 1712729 + Hsped.02g01590.1 Hepe02g0159 561660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0159 785 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Hepe02g0159 785 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Hepe02g0159 785 Pfam Leucine Rich Repeat 125 145 IPR001611 GO:0005515(InterPro)
Hepe02g0159 785 Gene3D Ribonuclease Inhibitor 40 256 IPR032675 -
Hepe02g0159 785 SUPERFAMILY Formin homology 2 domain (FH2 domain) 439 448 - -
Hepe02g0159 785 Gene3D Phosphorylase Kinase; domain 1 468 572 - -
Hepe02g0159 785 MobiDBLite consensus disorder prediction 287 305 - -
Hepe02g0159 785 SUPERFAMILY Protein kinase-like (PK-like) 470 769 IPR011009 -
Hepe02g0159 785 SUPERFAMILY L domain-like 51 241 - -
Hepe02g0159 785 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 573 783 - -
Hepe02g0159 785 MobiDBLite consensus disorder prediction 247 312 - -
Hepe02g0159 785 Gene3D Transferase(Phosphotransferase) domain 1 574 782 - -
Hepe02g0159 785 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 465 572 - -
Hepe02g0159 785 MobiDBLite consensus disorder prediction 252 286 - -
Hepe02g0159 785 PANTHER LEUCINE RICH REPEAT KINASE 2 73 771 IPR051420 -
Hepe02g0159 785 MobiDBLite consensus disorder prediction 389 411 - -
Hepe02g0159 785 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Hepe02g0159 785 Pfam Protein tyrosine and serine/threonine kinase 497 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0159 785 ProSiteProfiles Protein kinase domain profile. 495 773 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0159 Hepe-Chr2:1705438 Hepe02g1584 Hepe-Chr2:21031314 3.02e-129 dispersed
Hepe02g0159 Hepe-Chr2:1705438 Hepe04g1828 Hepe-Chr4:73243272 8.37e-180 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72516 PF07714 PK_Tyr_Ser-Thr 3.50E-41 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0159 - - - 0.0