Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0180 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGCAACGGGAGAAAAAGTTTGACCACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATACTAAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCCGTTCTCCCTCCCTATATGATTTTGTATTTAGGACCCCTTTCTTGTTGATGCACCTCACATTAAAACTAAATGAGACAAATAGTTTCCAACTTTGGATAAAGTGGAGAGAATGA 360 42.22 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVRSPSLYDFVFRTPFLLMHLTLKLNETNSFQLWIKWRE 119
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1881982 1884454 - Hsped.02g01800.1 Hepe02g0180 561681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0180 119 Gene3D - 1 83 - -
Hepe02g0180 119 SUPERFAMILY eIF1-like 4 80 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe02g0180 119 CDD eIF1_SUI1 29 82 IPR005874 GO:0003743(InterPro)
Hepe02g0180 119 Pfam Translation initiation factor SUI1 28 77 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe02g0180 119 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 81 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe02g0180 119 FunFam Eukaryotic translation initiation factor SUI1 2 84 - -
Hepe02g0180 119 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 82 - GO:0003723(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0180 Hepe-Chr2:1881982 Hepe02g0211 Hepe-Chr2:2104628 1.92e-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0180 K03113 - csv:101219651 168.703