Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0180 | ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGCAACGGGAGAAAAAGTTTGACCACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATACTAAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTCCGTTCTCCCTCCCTATATGATTTTGTATTTAGGACCCCTTTCTTGTTGATGCACCTCACATTAAAACTAAATGAGACAAATAGTTTCCAACTTTGGATAAAGTGGAGAGAATGA | 360 | 42.22 | MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVRSPSLYDFVFRTPFLLMHLTLKLNETNSFQLWIKWRE | 119 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1881982 | 1884454 | - | Hsped.02g01800.1 | Hepe02g0180 | 561681 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0180 | 119 | Gene3D | - | 1 | 83 | - | - | |
Hepe02g0180 | 119 | SUPERFAMILY | eIF1-like | 4 | 80 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0180 | 119 | CDD | eIF1_SUI1 | 29 | 82 | IPR005874 | GO:0003743(InterPro) | |
Hepe02g0180 | 119 | Pfam | Translation initiation factor SUI1 | 28 | 77 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0180 | 119 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 31 | 81 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0180 | 119 | FunFam | Eukaryotic translation initiation factor SUI1 | 2 | 84 | - | - | |
Hepe02g0180 | 119 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 1 | 82 | - | GO:0003723(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0180 | Hepe-Chr2:1881982 | Hepe02g0211 | Hepe-Chr2:2104628 | 1.92e-55 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0180 | K03113 | - | csv:101219651 | 168.703 |