Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0183 ATGGAGCTCTTCCGTGGTCTTGTCTGTCTAATTATATGTCTTTTAGGATTTGCTAGCTCAAGCCAAGCTCAGCTCGAGCTTGGTTACTATGCAAAGACCTGCCCTCGTGCCGAGAAAATCGTCTACGATTTCGTCTACAAGAACATTCCCAAGGTTCCGTCGTTGGCCGCTGCCTTCATTCGAATGCATTTCCACGATTGCTTCGTTCGGGGTTGTGATGCATCAGTGCTTTTGAACTCAACTGCTAACAACCAAAGTGAGAAGGTGTCTCCGCCAAATTTGACATTGAGAGGCTTCGACTTCATTGATAATATTAAGAAACTTCTAGAAGTTGAGTGCCCTGGAATCGTCTCGTGTGCCGACATTCTTACGCTAGTTGCAAGAGACTCCGTCGTTTCCATTGGCGGTCCATTTTGGAGGGTTCCAACGGGAAGAAGAGACGGTGTGGTCTCAATATCGTCGGAAGCTTTGAGGAACATTCCAGCACCATTTGCGAACTTCTCAACTCTCCAACAACAATTTGCCAACAAGGGGCTTGATCTAAAAGACTTGGTTTTGCTATCAGGAGCTCACACGATCGGAATATCACACTGCTCGTCATTCACAAGGCGTCTATACAACTTCACCGGAAAGGGAGACCAAGACCCATCGCTAGACAGCGAGTACGCAGCAAATCTGAAGGCAAAGAAATGCAAAAGCATAAGTGCGAACGGGATCGTGGAAATGGACCCGGGCAGTTTCAGAACCTTCGATCTCAGCTACTACTCTCTTCTCCTCAAGCGAAGAGGGTTGTTCCAGTCCGACGCGGCTCTCACCACCACCCAACTCACCAAGGCCTTCGTCACCGACCTACTCAATGGCTCGGTTCATGACTTCTTCGCTCAGTTTGGGCTGGCCATGGAGAAGATGGGTCGAATCGGAGTCAAGACTGGAGCCGAGGGTGAGATTCGTAAGAATTGTGCTCTTATTAATTAA 975 48.41 MELFRGLVCLIICLLGFASSSQAQLELGYYAKTCPRAEKIVYDFVYKNIPKVPSLAAAFIRMHFHDCFVRGCDASVLLNSTANNQSEKVSPPNLTLRGFDFIDNIKKLLEVECPGIVSCADILTLVARDSVVSIGGPFWRVPTGRRDGVVSISSEALRNIPAPFANFSTLQQQFANKGLDLKDLVLLSGAHTIGISHCSSFTRRLYNFTGKGDQDPSLDSEYAANLKAKKCKSISANGIVEMDPGSFRTFDLSYYSLLLKRRGLFQSDAALTTTQLTKAFVTDLLNGSVHDFFAQFGLAMEKMGRIGVKTGAEGEIRKNCALIN 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1906315 1907615 + Hsped.02g01830.1 Hepe02g0183 561684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0183 324 Pfam Peroxidase 42 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Hepe02g0183 324 SUPERFAMILY Heme-dependent peroxidases 24 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 CDD secretory_peroxidase 24 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Hepe02g0183 324 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 Gene3D - 29 324 - -
Hepe02g0183 324 PANTHER PEROXIDASE 25-RELATED 17 320 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Hepe02g0183 324 FunFam Peroxidase 28 169 - -
Hepe02g0183 324 FunFam Peroxidase 161 303 - -
Hepe02g0183 324 Gene3D Peroxidase, domain 2 161 303 - -
Hepe02g0183 324 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Hepe02g0183 324 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0183 Hepe-Chr2:1906315 Hepe03g0137 Hepe-Chr3:1655227 4.95e-102 dispersed
Hepe01g1943 Hepe-Chr1:84288469 Hepe02g0183 Hepe-Chr2:1906315 1.30e-71 transposed
Hepe02g0183 Hepe-Chr2:1906315 Hepe08g0477 Hepe-Chr8:4193591 1.76e-167 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0183 K00430 - csv:101213629 461.455