Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0211 ATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGGGCAAAAGAGTATGTTCATGTGCGCATACAGCAACGCAACGGGAGAAAAAGTTTGACCACTGTCCAAGGATTGAAGAAGGAATTTAGTTATAACAAGATACTAAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATTCAACTTCAGGGAGACCAAAGAAAGAATGTGTCTAGCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATGCACGGTTTCTGA 342 44.44 MSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKMHGF 113
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2104628 2106695 + Hsped.02g02110.1 Hepe02g0211 561712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0211 113 NCBIfam translation initiation factor SUI1 6 113 IPR005874 GO:0003743(InterPro)
Hepe02g0211 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743(InterPro)
Hepe02g0211 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe02g0211 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Hepe02g0211 113 Gene3D - 1 113 - -
Hepe02g0211 113 FunFam Eukaryotic translation initiation factor SUI1 2 113 - -
Hepe02g0211 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - GO:0003723(PANTHER)
Hepe02g0211 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743(InterPro)
Hepe02g0211 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g1530 Hepe-Chr1:80535841 Hepe02g0211 Hepe-Chr2:2104628 2.06e-55 dispersed
Hepe02g0180 Hepe-Chr2:1881982 Hepe02g0211 Hepe-Chr2:2104628 1.92e-55 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0211 K03113 - csv:101219651 225.713