Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0212 ATGCCAGCCGGAATGATGATTCCAGCCAGAAACACGCCGTCGATGATCGGAAGGAATGGAAATATTGGTGTTTTTGGCTCTCCGGCGAGCCTTGTTCTTGGTCAGGGTAATAATATGATGGAAGGGGGGCAGCTACATGCATTAGAAATGGCACAAAGTGGTTTGGGAGAAAGTGATTTTGGGAGAATGAGATCAGAAACAGAAGACTTTGACAGTGCAACTAAATCAAGCAGCGAGAACCACGAGGTTGGTTCAGGTGACGACCAAGACCAACAACGCCCCAAAAAGAAGCGTTACCACCGCCACACTCAGCTCCAGATCCAACAAATGGAAGCGTTCTTCAAGGAATGTCCTCACCCAGATGACAAGCAAAGGAAGGAGCTGAGTAGGGAGTTGGGTTTAGAGCCATTGCAAGTCAAGTTTTGGTTCCAAAACAAACGAACTCAGATGAAGACCCATCATGAGCGACATGAAAACACCCAGCTTCGAACCGATAATGAGAAGCTTCGAGCCGATAATATGAGGTACAGAGACGCTCTCGGTAACGCCACGTGTCCCAATTGCGGAGGCCCGACCGCCATTGGAGAGATGTCTTTTGATGAACATCATCTCAGACTTGAAAATGCCCGCTTGAGAGAAGAGATCGATCGCATTTCAGCCATAGCAGCAAAATACGTTGGAAAGCCAGTATCAAACTACCCTCTTCTTTCCCCACCAATTCATTCACGTCCTCTAGATCTTGGAATGGGAAGCTACGGAGGCCACGATTCAGGTCTCGGTGCCGGCGGGGACATGTACGGCGCAGCGGATCTTCTGAGGACCATAAGCGCGCCTTCAGAAGCCGATAAACCGATAATCATCGAGCTTGCGGTCGCGGCGATGGAGGAACTGGTCCGAATGGCTCAGATGGGTGAGCCGTTGTGGATGACGGCCCTTGATGGCTCGACGGCTGTGCTTAATGAAGATGAATATGTTAGAAGCTTTCCCAGAGGAATTGGACCTAAGCCCTCTGGGTTTAGCTGTGAAGCTTCTCGTGCTACTGCTGTTGTCATTATGAACCATATTAGCCTCGTTGAGATGCTCATGGATGTGAATCAGTGGTCAACCGTATTCACAGGGATTGTGTCAAGAGCTATGACATTAGAAGTATTGTCAACCGGCGTTGCTGGTAACTACAACGGAGCATTACAAGTGATGACATCCGAATTGCAAGTGCCTTCGCCCCTTGTTCCAACTCGGGAAAGCTATTTCGTGAGATACTGTAAACAACATTGTGAGGGAACTTGGGCTGTGGTCGACGTGTCGTTGGATACTTTGCGCCCTGCTCCTGCTCTTAGATCTAGAAGAAGGCCTTCCGGTTGTTTAATCCAAGAAATGCCCAATGGCTATTCTAAGGTTACGTGGGTTGAGCATGTCGAGGTGGATGATCGTGGGGTCCACAGTTTGTACAATCAGCTTGTTAGCTCTGGCCACGCCTTCGGCGCAAAGCGCTGGATTGCCACATTGGATCGTCAGTGTGAACGGCTCGCCAGTGCCATGGCGACGAGTATGCCGACCGGAGACGCCGGTGTGATAACGAATCAAGAAGGAAGAAAGAGCATGTTGAAGCTGGCAGAGAGAATGGTGATGAGTTTTTGCGGCGGAGTGAGCGCGTCGACCACACACACGTGGACAACATTGTCGGGAACTGGAGCTGATGACGTCAGAGTTATGACCAGAAAGAGCGTTGACGATCCTGGCCGTCCACCTGGCATTGTCCTCAGCGCCGCCACTTCCTTTTGGCTTCCTGTTCCTCCTAACAGAGTCTTCCATTTTCTCAGAGATGAAAATTCTCGCAATGAGTGGGATATTCTTTCCAATGGTGGAGTTGTGCAAGAAATGGGCCACATTGCCAATGGCCGTGACACAGGCAACTGCGTCTCATTGCTACGAGTAAACAGTGCAAATTCAAGCCAAGGCAACATGTTGATATTACAAGAGAGCAGCACAGATCAATCAGCCTCGTTTGTGATTTACGCGCCGGTGGACATTGTGGCCATCAACGTCGTGCTGAACGGCGGAGATCCCGATTATGTCGCCCTTCTCCCCTCTGGATTTGCCATTCTTCCCGACGGAACCGCCCCGTCCGGCGGAGGAGGTGGTAATGGTGTCGCTGACCACGGCTCCGGCGGGTCGCTTTTAACCGTTGCATTTCAGATTTTGGTCGATTCGGTTCCCACAGCTAAACTGTCTCTTGGGTCAGTTGCAACGGTCAACAATCTCATTGCGTGTACTGTTGAGAGGATTAAAGCCTCTTTGTCATGTGACAATCCATGA 2316 50.35 MPAGMMIPARNTPSMIGRNGNIGVFGSPASLVLGQGNNMMEGGQLHALEMAQSGLGESDFGRMRSETEDFDSATKSSSENHEVGSGDDQDQQRPKKKRYHRHTQLQIQQMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTHHERHENTQLRTDNEKLRADNMRYRDALGNATCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVSNYPLLSPPIHSRPLDLGMGSYGGHDSGLGAGGDMYGAADLLRTISAPSEADKPIIIELAVAAMEELVRMAQMGEPLWMTALDGSTAVLNEDEYVRSFPRGIGPKPSGFSCEASRATAVVIMNHISLVEMLMDVNQWSTVFTGIVSRAMTLEVLSTGVAGNYNGALQVMTSELQVPSPLVPTRESYFVRYCKQHCEGTWAVVDVSLDTLRPAPALRSRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHSLYNQLVSSGHAFGAKRWIATLDRQCERLASAMATSMPTGDAGVITNQEGRKSMLKLAERMVMSFCGGVSASTTHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPNRVFHFLRDENSRNEWDILSNGGVVQEMGHIANGRDTGNCVSLLRVNSANSSQGNMLILQESSTDQSASFVIYAPVDIVAINVVLNGGDPDYVALLPSGFAILPDGTAPSGGGGGNGVADHGSGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCDNP 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2108993 2117054 - Hsped.02g02120.1 Hepe02g0212 561713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0212 771 MobiDBLite consensus disorder prediction 58 103 - -
Hepe02g0212 771 FunFam Homeobox-leucine zipper protein GLABRA 2 288 507 - -
Hepe02g0212 771 CDD START_ArGLABRA2_like 283 507 - -
Hepe02g0212 771 Pfam START domain 289 508 IPR002913 GO:0008289(InterPro)
Hepe02g0212 771 ProSitePatterns 'Homeobox' domain signature. 128 151 IPR017970 GO:0000981(InterPro)|GO:0006355(InterPro)
Hepe02g0212 771 SMART HOX_1 94 157 IPR001356 GO:0003677(InterPro)
Hepe02g0212 771 Coils Coil 159 179 - -
Hepe02g0212 771 SUPERFAMILY Homeodomain-like 81 152 IPR009057 -
Hepe02g0212 771 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 80 768 IPR042160 -
Hepe02g0212 771 MobiDBLite consensus disorder prediction 61 94 - -
Hepe02g0212 771 CDD homeodomain 96 154 IPR001356 GO:0003677(InterPro)
Hepe02g0212 771 Gene3D - 81 169 - -
Hepe02g0212 771 Gene3D - 322 505 IPR023393 -
Hepe02g0212 771 SMART START_1 288 508 IPR002913 GO:0008289(InterPro)
Hepe02g0212 771 FunFam Homeobox-leucine zipper protein HDG1 83 169 - -
Hepe02g0212 771 Pfam Homeodomain 96 151 IPR001356 GO:0003677(InterPro)
Hepe02g0212 771 SUPERFAMILY Bet v1-like 281 510 - -
Hepe02g0212 771 ProSiteProfiles 'Homeobox' domain profile. 93 153 IPR001356 GO:0003677(InterPro)
Hepe02g0212 771 ProSiteProfiles START domain profile. 279 511 IPR002913 GO:0008289(InterPro)
Hepe02g0212 771 SUPERFAMILY Bet v1-like 527 763 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0212 Hepe-Chr2:2108993 Hepe03g0511 Hepe-Chr3:8847067 9.04e-251 dispersed
Hepe06g1797 Hepe-Chr6:69021519 Hepe02g0212 Hepe-Chr2:2108993 7.09e-200 transposed
Hepe02g1055 Hepe-Chr2:13006470 Hepe02g0212 Hepe-Chr2:2108993 9.21e-148 transposed
Hepe01g1298 Hepe-Chr1:78181203 Hepe02g0212 Hepe-Chr2:2108993 1.46e-124 wgd
Hepe02g0212 Hepe-Chr2:2108993 Hepe04g1781 Hepe-Chr4:72715185 0.0 wgd
Hepe02g0212 Hepe-Chr2:2108993 Hepe07g2012 Hepe-Chr7:64331400 0.0 wgd
Hepe02g0212 Hepe-Chr2:2108993 Hepe08g0472 Hepe-Chr8:4138873 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54939 PF01852 START 1.10E-56 CL0209 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0212 K09338 - csv:101219415 1342.02