Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0231 ATGGCCTGGACCCGACTCTCCCCCGTCGGCCATGGCTCCTCCGCCACCGTCTACCTCGCCTCCACCGCCCCCTCCGGCGACCTATTCGCCGTCAAGTCCGCCGAGCTCCCCAAATCGGGCTTCTTGAAAACAGAGCAAAGGATTCTTTCCTCTCTGTCCCACCCTTCGATTGTGGCCTACAGGGGATTCGATGTCACCAGAGAAAATGGGAAGCTAATGTATAATCTCTTCATGGAGTACGCCGCCGCCGGCACTCTTGCCGACGAAATTCTCCGGCGGGGAGGACGGATTAAGGAGGCCGCGGCGGGGTTTTACACTCGTCAAATTGTGAGGGGATTGGAGTATTTGCACAAAAGGGGTTTGGTGCATTGTGATGTTAAAGCTAAGAATGTTTTAATCAGCAAAGATGGTTTGAAGATTGCTGATTTCGGATGCTCCAAATGGGTTTGTGAAACGGCGGCGATCGGCGGAACGCCGATGTTCATGGCGCCAGAGGTGGCGCGTGGCGAAAAACAGGGGATATCCTCTGACATTTGGGCACTTGGGTGTACTTTAATCGAAATAGTCACCGGAGCTCCACCGTGGCCCACCGCCGAAGACCCAGTTTCGGTGCTGTATCAAATCGGATATTCCGGCGACTCGCCCGAAATTCCAATCTTTCTATCGGAGAAAGCTAAGGATTTTTTGGGGAAATGCTTGAAAAAGAACCCAACAGAACGGTGGAGTGCTAGTGAACTTCTTGAACATCCATTTATGGAGGAATTGAATTACGAGTTGGAGGAAATGAATGAATTACATTATCATTCCGATTCTCCGACGAGTATTTTAGATCAATGCGTTTGGAATTCGTTAGAAGAAGAATCGAAAACAGAGAAATGGGATGATGAGAGAATCAGAGGGCTGTCGATGTGGTCAGGGGAAATGAAGTGGGAATTGGAAGATGAGAATTGGATTACAATTAGAGATGAAAGCAAGAGGACAGTGGATGATGAAGATGAGGGTGAATCCGGAGCAGGAAAGAATAGTTAG 1029 49.47 MAWTRLSPVGHGSSATVYLASTAPSGDLFAVKSAELPKSGFLKTEQRILSSLSHPSIVAYRGFDVTRENGKLMYNLFMEYAAAGTLADEILRRGGRIKEAAAGFYTRQIVRGLEYLHKRGLVHCDVKAKNVLISKDGLKIADFGCSKWVCETAAIGGTPMFMAPEVARGEKQGISSDIWALGCTLIEIVTGAPPWPTAEDPVSVLYQIGYSGDSPEIPIFLSEKAKDFLGKCLKKNPTERWSASELLEHPFMEELNYELEEMNELHYHSDSPTSILDQCVWNSLEEESKTEKWDDERIRGLSMWSGEMKWELEDENWITIRDESKRTVDDEDEGESGAGKNS 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2349997 2351174 - Hsped.02g02310.1 Hepe02g0231 561732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0231 342 SUPERFAMILY Protein kinase-like (PK-like) 3 279 IPR011009 -
Hepe02g0231 342 MobiDBLite consensus disorder prediction 322 342 - -
Hepe02g0231 342 Pfam Protein kinase domain 5 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0231 342 ProSiteProfiles Protein kinase domain profile. 3 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0231 342 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524(InterPro)
Hepe02g0231 342 CDD STKc_MAPKKK 3 251 - -
Hepe02g0231 342 SMART serkin_6 3 252 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0231 342 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 253 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Hepe02g0231 342 Gene3D Transferase(Phosphotransferase) domain 1 2 315 - -
Hepe02g0231 342 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0231 Hepe-Chr2:2349997 Hepe04g1250 Hepe-Chr4:68007687 2.12e-61 dispersed
Hepe03g1269 Hepe-Chr3:68067516 Hepe02g0231 Hepe-Chr2:2349997 4.64e-33 transposed
Hepe08g1182 Hepe-Chr8:12123821 Hepe02g0231 Hepe-Chr2:2349997 2.16e-55 transposed
Hepe02g0231 Hepe-Chr2:2349997 Hepe04g1749 Hepe-Chr4:72521792 1.11e-103 wgd
Hepe02g0231 Hepe-Chr2:2349997 Hepe08g0454 Hepe-Chr8:3987877 3.87e-126 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72519 PF00069 Pkinase 2.10E-56 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0231 K20716 - csv:101205351 531.946