Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0232 | ATGGACGCCGCCCCTTCCCCTTCCCCCCCTCCCTCCTCCGCCACGCTGCACTTTCCGGTCAACCTCAATTCCACCCTCCACGAATCTCCTCCTCCTCCTCCACCCCCACCACCTCCTCCTCCCTCCTTCGACGGCCACCGCGCCTTCTTCGATGAGATGAACTTCTTCGCCGCCGATGATAAATCCCGCGTTCTTTCTGCCGCTGACTCCAAACCACCTGCCTCCGACAACCTCGACTTTAACGTAAATACTGGGTTGAATCTATTGACGACGAATTCGAGTAGTGATCAATCCATGGTGGATGAAGGAAATTCACCAAACCCAGATGACAAAAGAGCCAAAAACGAGAGAGTAGTTCTTCAAGCTGAATTGGAGAGAATAAACACAGAGAATCAACGATTAAAGGATATGTTAAATCAAGTGACGAGCAATTACCAAGCGTTGCAGATGCACTTCACAACACTAATTCAAAACCAAAAGGCAGCGGATGCCGGCGACCCAATTGACGAAAAGCCCGGTGGCGGTGGCCAAGAAAAGATCCGGCACGGCGGCGGAGGGAATAATAGTAATAAATTGGTGCCGAGGCAATTTATGGATCTCGGATTGGCCACGAATACGGAGACCGATGAGCCGTCGATTTCGTCGTCGGATGGGAGGAGCGGTGAGCGGTCGCGATCGCCGGGAGCCACCGGAGAAGTGGCATCGTCGAAACGGCAGAGCCCAGATCAAAGTTCGAATTGGGGTTCGAATAAAGTCCCTAAATTCAGTAGTTCTTCTTCTTCGGGTAAAGATGTGGATCAAACTGAAGCTACCATGAGAAAGGCTAGAGTCTCCGTTCGAGCCAGATCGGAAGCACCCATGATCACAGATGGATGCCAATGGAGAAAATACGGACAAAAAATGGCGAAGGGAAACCCTTGTCCTCGAGCTTACTACCGGTGCACCATGGCCGCCGGCTGCCCTGTTCGGAAACAAGTACAAAGATGTGCAGAAGACAAAACAATTCTGATAACAACCTACGAAGGAAACCACAACCACCCATTGCCACCGGCCGCCATAGCAATGGCATCGACAACATCATCGGCGGCCAGAATGCTTCTTTCCGGATCCATGTCAAGTGCAGATGGTTTAATGAACTCTAACTTTTTAGCAAGAACCCTATTGCCATGTTCTTCAAGCATGGCTACAATCTCAGCCTCAGCTCCATTTCCCACTGTCACATTAGACCTAACACAAAACCCTAATTCTTTATTCCAACGCCCCGCCGCCGGACATTTCCCCATCCCGTTCGGGGCTGCTCCGCCCCAAAGCTTCCCACAGATCTTCGGACATCCATTATACAACCAATCAAAATTCTCCGGCCTCCAAATGTCAAAGGACATGGAAGCGCCACCGCCTCCGCCGCAAAATCCATTGGCCGACACATTGAGCGCGGCGAGTGCTGCGATCGCTTCCGACCCGAATTTCATTGCGGCATTGGCGACGGCGATGACATCGTTAATCGGCGGATCTCATCATCAGAAGGAGAATGGTAATGGCAGTAATAATGTCGATAACAATACAAGTAGCAACTCCCAACAGTAA | 1584 | 51.07 | MDAAPSPSPPPSSATLHFPVNLNSTLHESPPPPPPPPPPPPSFDGHRAFFDEMNFFAADDKSRVLSAADSKPPASDNLDFNVNTGLNLLTTNSSSDQSMVDEGNSPNPDDKRAKNERVVLQAELERINTENQRLKDMLNQVTSNYQALQMHFTTLIQNQKAADAGDPIDEKPGGGGQEKIRHGGGGNNSNKLVPRQFMDLGLATNTETDEPSISSSDGRSGERSRSPGATGEVASSKRQSPDQSSNWGSNKVPKFSSSSSSGKDVDQTEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDKTILITTYEGNHNHPLPPAAIAMASTTSSAARMLLSGSMSSADGLMNSNFLARTLLPCSSSMATISASAPFPTVTLDLTQNPNSLFQRPAAGHFPIPFGAAPPQSFPQIFGHPLYNQSKFSGLQMSKDMEAPPPPPQNPLADTLSAASAAIASDPNFIAALATAMTSLIGGSHHQKENGNGSNNVDNNTSSNSQQ | 527 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2368024 | 2371657 | - | Hsped.02g02320.1 | Hepe02g0232 | 561733 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0232 | 527 | Gene3D | WRKY domain | 273 | 350 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 26 | 44 | - | - | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 89 | 104 | - | - | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 503 | 527 | - | - | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 1 | 48 | - | - | |
Hepe02g0232 | 527 | SMART | WRKY_cls | 288 | 348 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0232 | 527 | Pfam | WRKY DNA -binding domain | 290 | 347 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 89 | 112 | - | - | |
Hepe02g0232 | 527 | Coils | Coil | 110 | 151 | - | - | |
Hepe02g0232 | 527 | FunFam | probable WRKY transcription factor 31 | 273 | 350 | - | - | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 201 | 266 | - | - | |
Hepe02g0232 | 527 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 98 | 508 | IPR044810 | GO:0003700(InterPro) | |
Hepe02g0232 | 527 | MobiDBLite | consensus disorder prediction | 161 | 282 | - | - | |
Hepe02g0232 | 527 | ProSiteProfiles | WRKY domain profile. | 283 | 349 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0232 | 527 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 30 | 40 | - | - | |
Hepe02g0232 | 527 | SUPERFAMILY | WRKY DNA-binding domain | 281 | 349 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0232 | Hepe-Chr2:2368024 | Hepe09g0135 | Hepe-Chr9:1069494 | 6.28e-53 | dispersed | |
Hepe02g0232 | Hepe-Chr2:2368024 | Hepe04g1747 | Hepe-Chr4:72500171 | 1.02e-141 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54941 | PF03106 | WRKY | 2.40E-24 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0232 | - | - | - | 0.0 |