Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0249 | ATGGAGCAGCAGCCAGGATTTGGGGACAACAACAATAATCATATCAACACTCCTCTTTCTTCTTCACCTATTATCATCATCAATTCTACTTTGGATCACAACAACAACAATAACAAGATGTTCTTGCCTTTCTCTAATTGGTCTTCTTCTTCTTCTTCTACCCAATCTCAACCCAATCTCAACCATCATAATCTTCATAACAACTCCACTTCCACAGCTCAAATTATGGCTCATCCTCTCTTCCCCCGCCTCTTGGCCGCCTACGCCAACTGCCACAAGGTGGGTGCGCCGCCGGAAGTGGTGGCAAGGCTAGAGCAGGCGTGCGCGGTGGCGGCCGGAAGCTGTAGGACGGCGGCACGTGGGGATGATCCAGCGTTGGATCAGTTCATGGAGGCTTATTGTGAGATGTTGACCAAATACGAACAAGAGTTGACCAAGCCTTTCAAAGAAGCAATGCTTTTCTTCTCAAGAATTGAGTCTCAGCTCAAATCCATGGCAGTTTCTTCTTCTACTTCTGATGGTTGTGAGTTGGTCGGGCAAAACGAGTGTTCAAAGGAGATCGAGGTCGATATGAACGAAAACTACATTGACCCTCAAGCTGAAGAGAAGGAACTGAAAGGCCAGCTTCTTAGAAAATACAGTGGATACCTGGGCAGCCTAAAGCAAGAGTTTCTGAAGAAGAAGAAGAATGGAAAGTTGCCGAAAGAAGCCCGACAACAGCTGCTCGATTGGTGGAGTAGACACTACAAATGGCCATATCCCTCGGAGTCGCAAAAGGTGGCGCTGGCGGAGTCGACGGGGCTGGACTTGAAGCAGATAAATAACTGGTTCATCAACCAAAGAAAGCGGCATTGGAAGCCATCAGAGGATATGCAGTTTGTGGTGATGGATGCTGCTCATCCACACTACTATTTGGACAATGTCATCTGCACCAATCCCTTCTCTATGGACTGTTCTTCCACTCTTTTCTGA | 972 | 47.33 | MEQQPGFGDNNNNHINTPLSSSPIIIINSTLDHNNNNNKMFLPFSNWSSSSSSTQSQPNLNHHNLHNNSTSTAQIMAHPLFPRLLAAYANCHKVGAPPEVVARLEQACAVAAGSCRTAARGDDPALDQFMEAYCEMLTKYEQELTKPFKEAMLFFSRIESQLKSMAVSSSTSDGCELVGQNECSKEIEVDMNENYIDPQAEEKELKGQLLRKYSGYLGSLKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDLKQINNWFINQRKRHWKPSEDMQFVVMDAAHPHYYLDNVICTNPFSMDCSSTLF | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2487268 | 2491068 | - | Hsped.02g02490.1 | Hepe02g0249 | 561750 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0249 | 323 | ProSiteProfiles | 'Homeobox' domain profile. | 224 | 287 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | ProSitePatterns | 'Homeobox' domain signature. | 262 | 285 | IPR017970 | GO:0000981(InterPro)|GO:0006355(InterPro) | |
Hepe02g0249 | 323 | ProSiteProfiles | ELK domain profile. | 204 | 224 | IPR005539 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | FunFam | Homeobox protein knotted-1-like 2 | 229 | 291 | - | - | |
Hepe02g0249 | 323 | Pfam | KNOX1 domain | 73 | 109 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Hepe02g0249 | 323 | SMART | HOX_1 | 226 | 291 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | CDD | homeodomain | 236 | 288 | IPR001356 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | Pfam | ELK domain | 204 | 225 | IPR005539 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | Gene3D | - | 229 | 291 | - | - | |
Hepe02g0249 | 323 | SMART | KNOX2_2 | 116 | 167 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Hepe02g0249 | 323 | SMART | ELK_2 | 204 | 225 | IPR005539 | GO:0003677(InterPro) | |
Hepe02g0249 | 323 | Pfam | Homeobox KN domain | 244 | 283 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) | |
Hepe02g0249 | 323 | SUPERFAMILY | Homeodomain-like | 226 | 301 | IPR009057 | - | |
Hepe02g0249 | 323 | SMART | KNOX1_2 | 69 | 113 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Hepe02g0249 | 323 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 67 | 294 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Hepe02g0249 | 323 | Pfam | KNOX2 domain | 121 | 165 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0249 | Hepe-Chr2:2487268 | Hepe08g1369 | Hepe-Chr8:16039618 | 7.83e-76 | dispersed | |
Hepe02g0249 | Hepe-Chr2:2487268 | Hepe04g1740 | Hepe-Chr4:72434067 | 2.98e-125 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54944 | PF03791 | KNOX2 | 6.40E-22 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0249 | - | - | - | 0.0 |