Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0250 ATGGCACAGTTGCCGCCGAAGATCCCAAATATGGCGTCTAATTGGCCGGATTTCTCTCGTCAGAAAATCCATTCAATGGAAAGCTTTGCACCGACCACCACCACGGCGGCGTCGGCGGCGGAAGTTAACCACCAGAATCCTTCTTGGGTCGACGAATTTCTCGATTTTTCCTCCGCTCGACGTGGCTCCCACCGGCGGTCGGTTAGCGATTCGATCACATTCCTCGAAATGCCAATGCTGGAGGAAGATTGCCGGGGCTCCGCTGCTGCGCCGCCGTTGGGATCCGACACCGGCACCGGCGACGACCAGAATGAATTTGATAGATTCGACGACGAGCAATTCATGTCGATGTTCAACGACGACGAAATCTCTGCCGGCGCGGTGGGGCCCACCGTATCGTCGTCGAACCCGTCCACGTCGTCCGATCACAACAGTATTAACGACGAGAAAAACGGCCGAAACGACGACGGCGGCAAGGGAAATCAGAACAAAAACGAATCCGACGAAGTAGAGAGCCAACAGCAATCGGAAACTCAAACGCAATCCAATTCCTCGGCGGCGACGGCGGCTTCCACCGATCGGATAACAGACCCCAAAAGAGTCAAAAGAATTCTGGCAAATCGGCAATCGGCGCAAAGATCACGAGTGAGGAAGCTACAATACATATCAGAACTGGAACGAAGCGTCACATCGTTACAGGCTGAAGTATCGGTGCTGTCGCCGCGAGTGGCGTTTTTGGACCACCAGAGATTGCTTCTCAACGTCGACAACAGTGCTCTCAAGCAAAGAATCGCCGCCCTTGCTCAGGATAAGATTTTTAAAGATGCTCACCAAGAGGCACTAAAAAGAGAGATAGAGAGACTGAGACAAGTATATCACCAACAAAACATCAAGAAGACGATGGAAAATGCAGCACCAAATCCGCCACCAGCCGCCACCGCCACCGCCACCACGGTGGCCGAACTTCCTAATGTAGGTCAAAAAGAGAAAGTTCTAAATGTCGTCCCTCCCCAATAA 1017 52.61 MAQLPPKIPNMASNWPDFSRQKIHSMESFAPTTTTAASAAEVNHQNPSWVDEFLDFSSARRGSHRRSVSDSITFLEMPMLEEDCRGSAAAPPLGSDTGTGDDQNEFDRFDDEQFMSMFNDDEISAGAVGPTVSSSNPSTSSDHNSINDEKNGRNDDGGKGNQNKNESDEVESQQQSETQTQSNSSAATAASTDRITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHQQNIKKTMENAAPNPPPAATATATTVAELPNVGQKEKVLNVVPPQ 338
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2509442 2512697 - Hsped.02g02500.1 Hepe02g0250 561751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0250 338 MobiDBLite consensus disorder prediction 146 166 - -
Hepe02g0250 338 Gene3D - 198 271 - -
Hepe02g0250 338 MobiDBLite consensus disorder prediction 167 192 - -
Hepe02g0250 338 Coils Coil 278 298 - -
Hepe02g0250 338 CDD bZIP_plant_RF2 200 250 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 197 249 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 MobiDBLite consensus disorder prediction 85 106 - -
Hepe02g0250 338 SMART brlzneu 195 259 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 SUPERFAMILY Leucine zipper domain 199 253 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 Pfam Basic region leucine zipper 196 244 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 MobiDBLite consensus disorder prediction 124 200 - -
Hepe02g0250 338 MobiDBLite consensus disorder prediction 128 145 - -
Hepe02g0250 338 PANTHER BASIC LEUCINE ZIPPER 34 1 312 IPR052483 GO:0003677(PANTHER)|GO:0005634(PANTHER)|GO:0045893(PANTHER)
Hepe02g0250 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 202 217 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0250 338 FunFam Basic leucine zipper 61 198 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0250 Hepe-Chr2:2509442 Hepe10g1972 Hepe-Chr10:56752364 3.17e-11 dispersed
Hepe01g1419 Hepe-Chr1:79407367 Hepe02g0250 Hepe-Chr2:2509442 3.75e-54 transposed
Hepe10g1349 Hepe-Chr10:49663369 Hepe02g0250 Hepe-Chr2:2509442 3.41e-09 transposed
Hepe02g0250 Hepe-Chr2:2509442 Hepe08g0435 Hepe-Chr8:3823241 4.68e-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54945 PF07716 bZIP_2 4.30E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0250 - - - 0.0