Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0272 | ATGCCAAAGAACAAGGGAAAAGGAGGAAAGAATAGGAAGAGAGCTAAGAATGAGGCAGATGATGAGAAGCGTGAGCTTATGTTTAAGGAAGATGGTCGGTGTGAAGCGATGTGTATCGATGGGACTAAACGTCTTTGCCATATTCGGGGAAAAATGCACAAGAAAGTTTGGATTGCAGCTGGGGATATCATACTCGGTGGTCTCCGTGACTATCAAGACGACAAAGCTGATGTGATTCTCAAATACATGCCTGATGAAGCCAGGCTTTTGAAAGCTTACAGTGAGCTGAGCTACCTGAGAATACACGTCTTAACGAGGGCATTGTTGGCGGTATGGATGATGATGATGAAGGTGGTGGTGATGCTTATATTCAGTTGGAGGATGAAGACATTGACAAGATCTAGATGTTAG | 411 | 44.04 | MPKNKGKGGKNRKRAKNEADDEKRELMFKEDGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILGGLRDYQDDKADVILKYMPDEARLLKAYSELSYLRIHVLTRALLAVWMMMMKVVVMLIFSWRMKTLTRSRC | 136 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2661534 | 2662139 | + | Hsped.02g02720.1 | Hepe02g0272 | 561773 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0272 | 136 | Pfam | Translation initiation factor 1A / IF-1 | 31 | 80 | IPR006196 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0272 | 136 | PANTHER | EIF-1A | 1 | 97 | IPR001253 | GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0005737(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro) | |
Hepe02g0272 | 136 | Coils | Coil | 12 | 32 | - | - | |
Hepe02g0272 | 136 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Hepe02g0272 | 136 | SUPERFAMILY | Nucleic acid-binding proteins | 2 | 96 | IPR012340 | - | |
Hepe02g0272 | 136 | SMART | eIF1neu4 | 28 | 97 | IPR001253 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0272 | 136 | CDD | S1_IF1A | 31 | 96 | IPR001253 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0272 | 136 | Gene3D | - | 2 | 102 | IPR012340 | - | |
Hepe02g0272 | 136 | ProSiteProfiles | S1 domain IF1 type profile. | 31 | 83 | IPR006196 | GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro) | |
Hepe02g0272 | 136 | Hamap | Translation initiation factor 1A [eif1a]. | 3 | 97 | IPR001253 | GO:0003743(InterPro)|GO:0006413(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0272 | Hepe-Chr2:2661534 | Hepe05g1235 | Hepe-Chr5:59277457 | 1.32e-57 | dispersed | |
Hepe02g0272 | Hepe-Chr2:2661534 | Hepe08g0412 | Hepe-Chr8:3671443 | 2.27e-57 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0272 | K03236 | - | mtr:25500774 | 173.711 |