Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0291 | ATGGTTTCTTCAGGGGACCAGTTAGAGAATGAAGTTGATTCTGATCGATTGGAGCATGAACACAGTTCAGACAGTCAACCGCAAGCGTCTCAGGAGGATCCTGGTGGAACTAATGCATCAAAATCAGATCACAAATGCACTGCGGCTGCCATGATTACACTTGAAGAAGCTGTCAAGCAGCCTGAAGTTACAATCGAACAAGTGGATCGAGGAGGCATCTCTAAGATAGTGTCCGAGAAAGTGACCCATAAGCCAATTACTGCGGATCAGGACTCCCATCCTGATTTGAAAGTAAGTATTACCACTACTATACGAGAGAAAGTATCAGAGGATGGATATAACTGGCGGAAATATGGTCAGAAACTGGTAAAGGGAAATGTCTTTGTTAGAAGCTATTACAGATGCACGAATCCTTCTTGCATGGTGAAAAAACAACTGGAGCGCACTCATGATGGGAAAATCACAGACACTGTTTACTTTGGCCAGCATGATCACCCTAAACCTCAATCTCACATTCCAGTTGCTATTGGAGTTGTTACCATGGTTCAAGAAAAAATAGATGAACATGCTTCTGGGGGTTCTCAAGATAAGACCTCCATTGCGCTTGGCCAGACACCTCATAAAACCGAGCCGGCTGATACGCTTCAACCGTCATCAGTCATGGGCAGTGATAATGTAAAAGATGAAGCTTCGAAAAGGTCTAGGATTAATGATGAGGTTGACAGTGATGATACACCAGACTTGAAACGAGAGAAGAAAAGATGTAATATTGACGGGACAGTAGCAGACAAGTCAACTGTTGAATCTCGGGTTGTTGTTCAAACTCCTAGTGAGGTCGACATCCTCAACGACGGATACCGCTGGCGGAAGTATGGACAAAAATTAGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAGCATGTAGAGAGGGCGTCTCATGATCCAAAAGTGGTGCTTACCACTTATGAGGGTCAGCATGACCATGATATGCCTCCTTCAAGGACAGTGACGTTGAACTCGGTTGGCTCCACAGCAACCCATAGTGATGAGATGAAAACAAAATCGGTCAGTAGTTCCATTGGCCATGAGATGGTGGTTCATGCTACCAAGGATCCTCGAAGCAATTCAAGTTCTGAAGGCAAATTAATTGAAAAGAATGGCAAATCAAATGCCACAGAAGCAAGTGATGGCATTGTCCTCGATATGGTGGTAAATTCCAGTCCAGGAGTTGGGAGTGGACAAAATAAGCAGCTGAAAGTAGCAATTGAAAGCTAA | 1308 | 44.04 | MVSSGDQLENEVDSDRLEHEHSSDSQPQASQEDPGGTNASKSDHKCTAAAMITLEEAVKQPEVTIEQVDRGGISKIVSEKVTHKPITADQDSHPDLKVSITTTIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTNPSCMVKKQLERTHDGKITDTVYFGQHDHPKPQSHIPVAIGVVTMVQEKIDEHASGGSQDKTSIALGQTPHKTEPADTLQPSSVMGSDNVKDEASKRSRINDEVDSDDTPDLKREKKRCNIDGTVADKSTVESRVVVQTPSEVDILNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGQHDHDMPPSRTVTLNSVGSTATHSDEMKTKSVSSSIGHEMVVHATKDPRSNSSSEGKLIEKNGKSNATEASDGIVLDMVVNSSPGVGSGQNKQLKVAIES | 435 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2830726 | 2833883 | + | Hsped.02g02910.1 | Hepe02g0291 | 561792 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0291 | 435 | Gene3D | WRKY domain | 269 | 335 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | ProSiteProfiles | WRKY domain profile. | 277 | 342 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | ProSiteProfiles | WRKY domain profile. | 104 | 168 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | SMART | WRKY_cls | 282 | 341 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | SMART | WRKY_cls | 109 | 167 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 379 | 404 | - | - | |
Hepe02g0291 | 435 | Pfam | WRKY DNA -binding domain | 110 | 166 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | Pfam | WRKY DNA -binding domain | 283 | 340 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | Gene3D | WRKY domain | 95 | 169 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Hepe02g0291 | 435 | SUPERFAMILY | WRKY DNA-binding domain | 274 | 342 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 27 | 44 | - | - | |
Hepe02g0291 | 435 | FunFam | WRKY transcription factor 57 | 268 | 342 | - | - | |
Hepe02g0291 | 435 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 150 | 357 | IPR044810 | GO:0003700(InterPro) | |
Hepe02g0291 | 435 | SUPERFAMILY | WRKY DNA-binding domain | 102 | 168 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 381 | 404 | - | - | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 9 | 26 | - | - | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 193 | 225 | - | - | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 188 | 254 | - | - | |
Hepe02g0291 | 435 | MobiDBLite | consensus disorder prediction | 226 | 254 | - | - | |
Hepe02g0291 | 435 | FunFam | WRKY transcription factor | 98 | 169 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0291 | Hepe-Chr2:2830726 | Hepe09g1283 | Hepe-Chr9:17678289 | 1.86e-64 | dispersed | |
Hepe02g0291 | Hepe-Chr2:2830726 | Hepe06g0539 | Hepe-Chr6:30761365 | 1.58e-78 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54948 | PF03106 | WRKY | 2.90E-26 | CL0274 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0291 | K18834 | - | csv:101212482 | 707.983 |