Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0291 ATGGTTTCTTCAGGGGACCAGTTAGAGAATGAAGTTGATTCTGATCGATTGGAGCATGAACACAGTTCAGACAGTCAACCGCAAGCGTCTCAGGAGGATCCTGGTGGAACTAATGCATCAAAATCAGATCACAAATGCACTGCGGCTGCCATGATTACACTTGAAGAAGCTGTCAAGCAGCCTGAAGTTACAATCGAACAAGTGGATCGAGGAGGCATCTCTAAGATAGTGTCCGAGAAAGTGACCCATAAGCCAATTACTGCGGATCAGGACTCCCATCCTGATTTGAAAGTAAGTATTACCACTACTATACGAGAGAAAGTATCAGAGGATGGATATAACTGGCGGAAATATGGTCAGAAACTGGTAAAGGGAAATGTCTTTGTTAGAAGCTATTACAGATGCACGAATCCTTCTTGCATGGTGAAAAAACAACTGGAGCGCACTCATGATGGGAAAATCACAGACACTGTTTACTTTGGCCAGCATGATCACCCTAAACCTCAATCTCACATTCCAGTTGCTATTGGAGTTGTTACCATGGTTCAAGAAAAAATAGATGAACATGCTTCTGGGGGTTCTCAAGATAAGACCTCCATTGCGCTTGGCCAGACACCTCATAAAACCGAGCCGGCTGATACGCTTCAACCGTCATCAGTCATGGGCAGTGATAATGTAAAAGATGAAGCTTCGAAAAGGTCTAGGATTAATGATGAGGTTGACAGTGATGATACACCAGACTTGAAACGAGAGAAGAAAAGATGTAATATTGACGGGACAGTAGCAGACAAGTCAACTGTTGAATCTCGGGTTGTTGTTCAAACTCCTAGTGAGGTCGACATCCTCAACGACGGATACCGCTGGCGGAAGTATGGACAAAAATTAGTGAAAGGCAATCCAAATCCTAGGAGTTACTACAGATGCTCAAGTCCTGGATGTCCAGTTAAGAAGCATGTAGAGAGGGCGTCTCATGATCCAAAAGTGGTGCTTACCACTTATGAGGGTCAGCATGACCATGATATGCCTCCTTCAAGGACAGTGACGTTGAACTCGGTTGGCTCCACAGCAACCCATAGTGATGAGATGAAAACAAAATCGGTCAGTAGTTCCATTGGCCATGAGATGGTGGTTCATGCTACCAAGGATCCTCGAAGCAATTCAAGTTCTGAAGGCAAATTAATTGAAAAGAATGGCAAATCAAATGCCACAGAAGCAAGTGATGGCATTGTCCTCGATATGGTGGTAAATTCCAGTCCAGGAGTTGGGAGTGGACAAAATAAGCAGCTGAAAGTAGCAATTGAAAGCTAA 1308 44.04 MVSSGDQLENEVDSDRLEHEHSSDSQPQASQEDPGGTNASKSDHKCTAAAMITLEEAVKQPEVTIEQVDRGGISKIVSEKVTHKPITADQDSHPDLKVSITTTIREKVSEDGYNWRKYGQKLVKGNVFVRSYYRCTNPSCMVKKQLERTHDGKITDTVYFGQHDHPKPQSHIPVAIGVVTMVQEKIDEHASGGSQDKTSIALGQTPHKTEPADTLQPSSVMGSDNVKDEASKRSRINDEVDSDDTPDLKREKKRCNIDGTVADKSTVESRVVVQTPSEVDILNDGYRWRKYGQKLVKGNPNPRSYYRCSSPGCPVKKHVERASHDPKVVLTTYEGQHDHDMPPSRTVTLNSVGSTATHSDEMKTKSVSSSIGHEMVVHATKDPRSNSSSEGKLIEKNGKSNATEASDGIVLDMVVNSSPGVGSGQNKQLKVAIES 435
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2830726 2833883 + Hsped.02g02910.1 Hepe02g0291 561792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0291 435 Gene3D WRKY domain 269 335 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 ProSiteProfiles WRKY domain profile. 277 342 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 ProSiteProfiles WRKY domain profile. 104 168 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 SMART WRKY_cls 282 341 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 SMART WRKY_cls 109 167 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 MobiDBLite consensus disorder prediction 379 404 - -
Hepe02g0291 435 Pfam WRKY DNA -binding domain 110 166 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 Pfam WRKY DNA -binding domain 283 340 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 Gene3D WRKY domain 95 169 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 MobiDBLite consensus disorder prediction 1 44 - -
Hepe02g0291 435 SUPERFAMILY WRKY DNA-binding domain 274 342 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 MobiDBLite consensus disorder prediction 27 44 - -
Hepe02g0291 435 FunFam WRKY transcription factor 57 268 342 - -
Hepe02g0291 435 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 150 357 IPR044810 GO:0003700(InterPro)
Hepe02g0291 435 SUPERFAMILY WRKY DNA-binding domain 102 168 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Hepe02g0291 435 MobiDBLite consensus disorder prediction 381 404 - -
Hepe02g0291 435 MobiDBLite consensus disorder prediction 9 26 - -
Hepe02g0291 435 MobiDBLite consensus disorder prediction 193 225 - -
Hepe02g0291 435 MobiDBLite consensus disorder prediction 188 254 - -
Hepe02g0291 435 MobiDBLite consensus disorder prediction 226 254 - -
Hepe02g0291 435 FunFam WRKY transcription factor 98 169 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0291 Hepe-Chr2:2830726 Hepe09g1283 Hepe-Chr9:17678289 1.86e-64 dispersed
Hepe02g0291 Hepe-Chr2:2830726 Hepe06g0539 Hepe-Chr6:30761365 1.58e-78 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54948 PF03106 WRKY 2.90E-26 CL0274 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0291 K18834 - csv:101212482 707.983