Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0325 | ATGGGCATCTCCAGTCTCCCAGCTCCATCTGAAGGAGTCCTTAACGTGCTTATTATAAACACTGCACTATCCATTTCCATGTTCAAATGCATTGTTCGTTTGATCCTTGACATTGTAGGGATCCGTCTCTCATCACCATCATCCTTGGTCCCATCATCAGTTTCCTTTGAGAATTCCTCAGAGTTAGGAGATTCCAATCTTGGTTCATCTTGGAGTTACATCGAGATGTTTAGGAACCGATATCCAGCAATTAGGTTTGATAAAGTACAGGGCCCTGAACGTTGTGAACATGACTGCTCGGTCTGCTTAACACAGTTTGAACCTGAGTCGGAGATAAATCACTTATCTTGTGGCCATCTTTTTCACACAGAATGCTTGGAGAAGTGGCTGGACTACTGGAATGTTACATGTCCTCTTTGCAGAACACCTCTAATGTCCGAGGAAGAGAAATCGTGCTTTTGGTGA | 465 | 43.66 | MGISSLPAPSEGVLNVLIINTALSISMFKCIVRLILDIVGIRLSSPSSLVPSSVSFENSSELGDSNLGSSWSYIEMFRNRYPAIRFDKVQGPERCEHDCSVCLTQFEPESEINHLSCGHLFHTECLEKWLDYWNVTCPLCRTPLMSEEEKSCFW | 154 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3102759 | 3104534 | - | Hsped.02g03250.1 | Hepe02g0325 | 561826 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0325 | 154 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 69 | 146 | IPR013083 | - | |
Hepe02g0325 | 154 | Pfam | Ring finger domain | 98 | 141 | IPR001841 | - | |
Hepe02g0325 | 154 | SUPERFAMILY | RING/U-box | 91 | 145 | - | - | |
Hepe02g0325 | 154 | PANTHER | - | 1 | 154 | IPR044249 | - | |
Hepe02g0325 | 154 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 141 | IPR001841 | - | |
Hepe02g0325 | 154 | SMART | ring_2 | 99 | 140 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0325 | Hepe-Chr2:3102759 | Hepe05g1963 | Hepe-Chr5:70105817 | 1.77e-11 | dispersed | |
Hepe02g0325 | Hepe-Chr2:3102759 | Hepe08g0373 | Hepe-Chr8:3353296 | 1.86e-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0325 | K16285 | - | csv:101215843 | 257.684 |