Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0334 ATGTTCAAGAATAAAAAAGGTTCACTGTTATGCAAAATATTTCCATTGGAACTTCTTCCTTGCAGTTTCACACTTTGGCTTGTTTGGTTTGACAGTACGTTTCGTACACGTGCAAGAGAGAAAGATCAGAAAAAGGATGAGAAGAGAGAAACCAAAGAGCCATCAAGCTCTAATATCTCATCTTCTGTTTGTCAAATCATCCCTACAGAGAAGAGGATACCAATTGAAGTCTTTCAAGTGCCTGCAAGTTTGGGCGATGGCCATTCCAAAGGGCAGAGTGATGCCACTCATGAGCAGAATGAGGCAAAACCATCCCTATCTTCCTTTTGTCCTGCTGTCAGCATGGAAGCATCCAGAAAGTGGATGGCATTTGAAAGTGAAAACTTTGATATTACAAAGACATACACAAAGAACTTCAGTTGTACTGAACTCTCGGAAAGAAACACGACAGAGAGGATTGTAGAGGAGAACAAGAATGATGGTTTATCATCGCTGCAACTGACGTATGTTATCTCAGATGCAACAAAACCAGATTGCCCCATCGTGTTTGCCAGCTATAGGTTCTTGGTTATGACTGGATATACGTTGAAGGAGGTCATTGGAAGGAACTGCCGGTTTCTTCAAGGACCAGAGACAGATAAGAATGAAGTAGCCAAAATACGAGACGCGATCAGAAAGGGGATTAGCTTCTGTGGCAAACTCTTGAATTACAAGAAGAATGGTACTCCTTTCTGGAATCTTCTCACTATTGGGCCTGTCAAAGATTCCAATGGCAACATCATCAAATTTATTGGAATGCAGGTTGAGATCGGCAAAAACACAGAAGAAAAAGAGAAGATAATGAGGTCCATGTCCATTACAGAGGTCGAAGCTGAGAAGGTAATTAGGTCCATTGTGGAGGTCCAAGCTGTGAAAGGTCTAAGATCTTACATTCAGTCAAAAAGGCATGATGCTGAAAGAAAGCACGAAGAGTTAGAAACGACTGACGTTGATTATGCTCTGCACAAGGTTGTGGATGATGAGAATATTGGCACACCCGATAACCAAAAGGCTCAGCTCAAAGAAAGGAGTCTAGGCTCTGCAGTAGAATGTGAAGAAAAGACAGTTGTTGAGACATCAGTTTTGAAGCCTAAGGACGGTGATCGTGTTGCTAAAAGGGAAAGGAACATACGTCAAGGAATTGAAATGGCAACCACATTGGAATGGATAGAGAAGATATTTTTTATCACTAACCCAAGACTTCCAGATAATCCTATTATATTTGTATCTAAAAGATTTCTCGACTCCACAGAATACACGCGTGAAGAGGTTCTAGGGAGAAACTTTTGGTTTCTTCAGGGACCTGAAACAGATCAAGTAGTTGTCTCAAAGATAAAAGATGCAATTGAAGAGCAGAGAGAAATCACTCTTCAGATAATCAACTATACTAAGAGTGGAAAAAAGTTCTCAAATTTATTCCACTTGCAACCCATGTGTGATCAAAAGAAGGGCGAGCTTCAATACTTCATTGGGGTGCAACTTCATGTAAAACCTTCGAGAGACAAACTTTTAGAACGCACGGAGCATGAAAGTACTAAGCTGGTCAAAGCTATAGCAGAAAATGTTGACAAGGCAGTCCGTGAACTTCCTGATGCCAACTTGAAACCAAAGAACTTGTGGGCAATCTACTGTCAGCCAGTCATACCAAGGCCTCACAAGAAGAACAATTCCTCCTGGATAGCCATACAAAAGATTACCAGTCATGGTGAAAAGATTGGACTCCATCATTTTAAGCCAATAAAACCACTGGGTTTTGGAGACATTGGCAGTGTTCATTTGGTAGAACTGAAAGGAACGGGTGAACTCTTTGCTATGAAGGCAATAGAGAAGTCGGTAATATTAAATCGTAACAAGGTTCACCGAGCATGCATGGAAAGGGAAATCATATCCCTTTTGGATCATCCTTTCATGCCAACACTATACTCTTCATTTCAGACGCCTACACACATTTTTCTTATTATAGACTTCTTCCCTGGTGGAGAGTTATTTGCCTTTCTTGACAAGCAGCCAATGAAAATGTTTAAAGAGGAAGCTGCTAGGTTTTATGCTGCAGAAGTTGTCATTGCTTTGGAATACCTTCACTGTTTAGGTATTATCTACCGGGATCTAAAACCCGAAAACATTCTACTCGAGAAGGATGGACATATCGTCCTCGTTGATTATGATTTATCGTTTAAGACGTCTAACATACAAGCCATAGAATCTCCACCACAGAAAAAGACGAAGAGATGTAAGCATAAACCGCTGCCAAAGTTCGTCGTCGAACCTGTTGTAGAACTGAATTCATTCATTGGAACTGAAGAGTACTTTGCTCCAGAGATCATAATGGGAGCAAGCCATAGTAGCTCTATTGACTGGTGGACTCTTGGTATTTTGTTGTATGAAATGCTCTATGGTCGCACTCCATTCAAAGGCAAAAACAGGAAGAAAACATATGCTAATATTTTGTTCAAGGACTTAACTTTCCCCCTCAGTATTCAGGCAAGTCTAGCAGCAAAGCAGCTGATTGATGCACTACTAAAGAGAGACCCTGCACGTCGTCTAGGATCAAGTACTGGTGCCGATGAAATCAAACGACATCCATTTTTCCGTCAAATAGATTGGCCTAAAATTCGAACCATGACCCCACCAGCATCAGAAGTAGCCCTTCAATTAATTGGGAGAGATCCAAAAGCTAATGATTTGAAGTGGGAAGATGAAATCCTCAGCCATTCAATAGGCACTGATGTTTTCTAA 2775 40.94 MFKNKKGSLLCKIFPLELLPCSFTLWLVWFDSTFRTRAREKDQKKDEKRETKEPSSSNISSSVCQIIPTEKRIPIEVFQVPASLGDGHSKGQSDATHEQNEAKPSLSSFCPAVSMEASRKWMAFESENFDITKTYTKNFSCTELSERNTTERIVEENKNDGLSSLQLTYVISDATKPDCPIVFASYRFLVMTGYTLKEVIGRNCRFLQGPETDKNEVAKIRDAIRKGISFCGKLLNYKKNGTPFWNLLTIGPVKDSNGNIIKFIGMQVEIGKNTEEKEKIMRSMSITEVEAEKVIRSIVEVQAVKGLRSYIQSKRHDAERKHEELETTDVDYALHKVVDDENIGTPDNQKAQLKERSLGSAVECEEKTVVETSVLKPKDGDRVAKRERNIRQGIEMATTLEWIEKIFFITNPRLPDNPIIFVSKRFLDSTEYTREEVLGRNFWFLQGPETDQVVVSKIKDAIEEQREITLQIINYTKSGKKFSNLFHLQPMCDQKKGELQYFIGVQLHVKPSRDKLLERTEHESTKLVKAIAENVDKAVRELPDANLKPKNLWAIYCQPVIPRPHKKNNSSWIAIQKITSHGEKIGLHHFKPIKPLGFGDIGSVHLVELKGTGELFAMKAIEKSVILNRNKVHRACMEREIISLLDHPFMPTLYSSFQTPTHIFLIIDFFPGGELFAFLDKQPMKMFKEEAARFYAAEVVIALEYLHCLGIIYRDLKPENILLEKDGHIVLVDYDLSFKTSNIQAIESPPQKKTKRCKHKPLPKFVVEPVVELNSFIGTEEYFAPEIIMGASHSSSIDWWTLGILLYEMLYGRTPFKGKNRKKTYANILFKDLTFPLSIQASLAAKQLIDALLKRDPARRLGSSTGADEIKRHPFFRQIDWPKIRTMTPPASEVALQLIGRDPKANDLKWEDEILSHSIGTDVF 924
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3193228 3204354 + Hsped.02g03340.1 Hepe02g0334 561835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0334 924 PANTHER FLIPPASE KINASE 1-RELATED 523 893 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Hepe02g0334 924 Pfam PAS domain 175 270 IPR000014 -
Hepe02g0334 924 Pfam PAS domain 414 505 IPR000014 -
Hepe02g0334 924 SUPERFAMILY PYP-like sensor domain (PAS domain) 407 506 IPR035965 -
Hepe02g0334 924 MobiDBLite consensus disorder prediction 39 62 - -
Hepe02g0334 924 SMART serkin_6 590 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0334 924 MobiDBLite consensus disorder prediction 85 107 - -
Hepe02g0334 924 ProSiteProfiles Protein kinase domain profile. 590 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0334 924 ProSitePatterns Serine/Threonine protein kinases active-site signature. 711 723 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0334 924 SUPERFAMILY Protein kinase-like (PK-like) 566 897 IPR011009 -
Hepe02g0334 924 MobiDBLite consensus disorder prediction 39 54 - -
Hepe02g0334 924 Gene3D Phosphorylase Kinase; domain 1 589 673 - -
Hepe02g0334 924 ProSiteProfiles PAS repeat profile. 154 227 IPR000014 -
Hepe02g0334 924 ProSiteProfiles PAS repeat profile. 416 465 IPR000014 -
Hepe02g0334 924 Gene3D Transferase(Phosphotransferase) domain 1 674 891 - -
Hepe02g0334 924 SMART pac_2 231 273 IPR001610 -
Hepe02g0334 924 SMART pac_2 469 512 IPR001610 -
Hepe02g0334 924 SMART pas_2 394 463 IPR000014 -
Hepe02g0334 924 SMART pas_2 156 225 IPR000014 -
Hepe02g0334 924 FunFam Protein kinase C 673 894 - -
Hepe02g0334 924 CDD STKc_phototropin_like 588 890 - -
Hepe02g0334 924 CDD PAS 406 509 IPR000014 -
Hepe02g0334 924 Pfam Protein kinase domain 593 876 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0334 924 Gene3D PAS domain 381 542 - -
Hepe02g0334 924 ProSiteProfiles PAC domain profile. 228 282 IPR000700 -
Hepe02g0334 924 Gene3D PAS domain 169 333 - -
Hepe02g0334 924 NCBIfam PAS domain S-box protein 181 279 IPR000014 -
Hepe02g0334 924 NCBIfam PAS domain S-box protein 418 503 IPR000014 -
Hepe02g0334 924 CDD PAS 181 270 IPR000014 -
Hepe02g0334 924 SUPERFAMILY PYP-like sensor domain (PAS domain) 175 268 IPR035965 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0334 Hepe-Chr2:3193228 Hepe08g0842 Hepe-Chr8:7607966 5.01e-274 dispersed
Hepe05g0013 Hepe-Chr5:171988 Hepe02g0334 Hepe-Chr2:3193228 3.86e-54 transposed
Hepe09g0158 Hepe-Chr9:1256377 Hepe02g0334 Hepe-Chr2:3193228 7.65e-60 transposed
Hepe02g0334 Hepe-Chr2:3193228 Hepe04g1697 Hepe-Chr4:72109626 2.34e-93 wgd
Hepe02g0334 Hepe-Chr2:3193228 Hepe08g0359 Hepe-Chr8:3219992 0.0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72522 PF00069 Pkinase 8.60E-60 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0334 K20715 - csv:101213364 1419.45