Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0345 ATGTCGGTTTCTCAAACCCTAGGTGGTTCCTCCAGATGCGGCCGCGCGATCGGTCCTTCTCTCGATAAGATTGTCAAGAACGCCGCCTGGCGTAAGCATTCTCACCTTGTTTCCTCTTGCAAATCCGTTTTAGATAAGCTTGATTCTATCGCCGAGGCTTCTCCTCCTGATCCCACCTCCCCTCTCGCCGGCCTTTCACCTACTGATGCCGATTTTGTTCTCCAACCTCTCCTTTTCGCCCTTGATGCCGCTTACGTCAAGGTTGCTGAGCCCGCGCTTGAGTGCGTCTTCAAATTGTTCTCCCGCGGTCTTTTCCGCGGCGAGATCGAACGCCCCGATGGCGAGGCCATTTCCGGTCCCGGTTCTATTGTGTATAAGATCGTTGAGTCTGTCTGTAAGTCGGGCGGTCTCGGCGACGAAGGAGTTGAGCTCACTGTTCTCAGAGTGTTGCTCTCCGCGGTTCGATGCCCTTGTGTGTTGATCCGCGGGGATTGTTTGGTTAATGTTGTTCGGACTTGTTATAATGTGTATCTCGGTGGCTTAAGTGGTACGAATCAGATCTGTGCCAAATCCGTTCTTGGTCAGATAATGGTCGTTGTTTTCAGTAGGGTGGAGGAGGACTCCATGGATGTTCCTACGAGGATAATTTCTGTGAGTGAATTATTGGAATTTACTGATAAGAACTTGAATGAAGGCAATTCTATATATTTTTGCCAGAACTTTATCAATGAGGTAATGGATGCTAGCGAAGGGATTGCGGAGAAGAAACTATATTCGTTTTCCGCACAATTGCAGAATGGCAATGCTTCGCCACTGAAAACTGAAAATAAAGGCGAATCTGATGTAGGAGAAACGGAAGATGGAGCTGAATCAGTTGGTTGTAGTAAGATTAGGGAGGATGGATTCCATTTGTTTAAGAATTTGTGTAAATTGTCAATGAAATTCTCATCACCGGAGCACCCAGACGATCATATCCTTTTAAGGGGGAAAATATTGTCTCTGGAACTGCTAAAGGTGGTTATGGATAATGCAGGTCCAGTTTGGCGCTCTAACGAGAGGTTTCTCAATGCTATCAAGCAGTTTCTCTGCTTATCATTATTGAAAAACAGTGCCCTTTCGGCGATGGCCATCTTCCAGCTTCAATGTTGTATTTTTACAAGCTTGTTGACAAAATTTAGATCAGGATTGAAAGCAGAGATTGGTATCTTTTTTCCCATGCTTGTTCTCCGAGTGCTTGAGAATGTACTTCAGCCTAGTTTCTTGCAGAAAATGACCGTGCTCAATTTATTGGATAAGATATCTCAAGATCCACAGATTATGGTCGACATTTTTGTCAACTATGATTGTGATGTTGATTCTCCAAATATTTTCGAAAGGATTGTGAATGGCCTTTTGAAAACTGCTCTTGGACCGCCTTCTGGTTCAACCACAACATTGTCTCCAGCACAGGATGTTACATTCAGGCATGAATCTGTTAAGTGTTTGGTAAGCATCATTAAATCAATGGGAACTTGGATGGACCAACAACTGAAGCTAGATGATGCACTTCTTAAGGCTTCCGAGAATGACGCTTCACCTGAGAATCCCTTAAGTGGGGAAGAAACAGCTGCTGTTGACTCTGAGCTCCATCCGGATGGAAATTCTGAGTCCTCAGATGCTGCTACACTTGAGCAACGCAGAGCTTACAAAATCGAACTCCAGAAAGGTATTTCGCTGTTCAATAGGAAACCTTCCAGGGGTATTGAGTTTCTTATTAGCACAAAAAAAGTTGGTGGTTCTCCTGAAGAGGTGGCTTCTTTTCTCAAGAATAATAACGGCCTGAATGAAACAGTCATTGGGGATTATTTGGGTGAAAGGGAGGAATTCCCTTTGAAAGTTATGCATGCTTATGTTGATTCATTTAATTTTAAAGTGATGGACTTTGGTGAAGCAATAAGGTTTTTCCTGCGAGGCTTCAAGTTACCAGGAGAGGCACAAAAGATCGATCGCATCATGGAGAAGTTTGCTGAGCGGTACTGTAAATGTAACCCTGGTTCATTCACAAGTGCAGATACTGCTTATGTTCTTGCTTATTCTGTTATTATGCTGAACACAGATGCTCATAATAACATGGTGAAAGATAAGATGACAAAAGCTGATTTTATCCGGAATAATCGAGGAATTGATGACGGCAAGGATATACCTGATGAGTATCTTGGTGCTCTTTATGATCAGATTGTTAGGAATGAAATTAAGATGAATTCTGATTCTTCAGCTTCACAAAGTAAGCAGGCAACTAGCATCAACAAACTTTTGGGCTTGGATGGTATACTGAATCTAGTTTCTTGGAAGCCGACAGAAGAAAAAGCTGTCGGTGCTAACGGGCTTCTTATAAGGCACATACAGGAACAGTTTAAGGCGAAGTCTGGAAAATCTGAATCTATTTATCACGCTGTGACTGATGCAACAATATTGAGGTTTATGGTGGAAGTCTGCTGGGGTCCTATGTTGGCGGCATTCAGTGTGACTCTTGACCAAAGCGATGATAAACTTGCTACTTCTCTATGCTTACTAGGCTTTCGGCATGCTGTGCATGTCACAGCTGTCATGGGCTTGCAGACTCAAAGGGATGCTTTCGTGACATCCATGGCTAAGTTTACCTATCTTCATTGTGCTGCAGATATGAAACAAAAAAATGTTGAAGCTGTGAAGGCTATAATATCAATTGCCATAGAGGATGGTAATTTTCTTCAAGAGGCATGGGAGCACATATTTACATGTCTCTCTAGAATTGAGCATTTACAATTATTGGGAGAGGGTGCACCACCCGATGCATCGTTTTTGACTTCGTCAAATATCGAAACTGAAGAGAAAGCACTGAAGTCGGTGGGTTTATCATCTCTGAAGAAAAAGGGAGGTCTCCAAAATCCGGCTGTTATGGCGGTTGTTCGTGGAGGTTCATATGACAGCACCTCTCTTGGAGCGAAGTCTACAGGACTAGTAACTCCTGAACAGATTAACCACCTTATTTCAAACTTGAATTTGCTGGATCAAATAGGCAATTTTGAGTTGAACCACGTATTTGCTCATAGTCAAAGCTTGAACAGTGAAGCAATAGTAGCATTTGTGAAGGCCCTTTGCAAAGTTGCTATTGCAGAGTTGCAGTCTCCAACAGACCCACGTGTGTTCAGCCTCACCAAATTAGTTGAAGTGGCGCATTACAACATGAACCGCATCAGATTGGTGTGGTCTCGCATGTGGAATGTTCTCTCTGATTTCTTTGTGTCAGTTGGCTTATCAGAAAATCTGTCAGTTGCAATATTTGTGATGGACTCACTGAGGCAGCTCGCAATGAAATTTTTGGAGCGAGAGGAGCTTGCAAATTATAACTTCCAGAATGAATTTCTGAGACCCTTTGTAATTGTTATGCAGAAAAGCGGCTCCACGGAAATTAGGGAATTAATAGTTCGGTGCATTTCACAGATGGTTCTCAGCCGCGTCAATAATGTGAAATCTGGATGGAAAAGTGTTTTTATGGTTTTCACTGCTGCTGCTGCTGATGAGCGGAAGAATATTGTCTTATTGGCTTTTGAAACCATGGAAAAAATAGTTCGAGAATATTTTCCTTATATAACCGAGACTGAAACTACAACGTTTACCGATTGTGTTCGATGTCTCATCACTTTCACAAATAGCAGATTTAACAGTGATGTTAGTCTCAATGCCATTGCGTTCCTTCGGTTTTGTGCTGTAAAACTTGCAGAAGGGGGACTTGTTTGCTATGAGATGGCTGGAGATAATGGTTCATCCAATTCTCCAGATGCACCCCCACCCCCACCCACAGATAAGGATGATTATGCTTCCTATTGGGTTCCTTTGCTTGCAGGGCTATCAAAGTTAACATCTGATCCTAGATCACCCATCAGAAAAAGTTCCTTGGAAGTACTTTTTAATATCCTAAAGGATCATGGTCATCTTTTCTCACGTCAATTTTGGGTTGGTGTAATCAATACCGTAGTTTTCCCTATATTCAGTTCTTTGCATGACAAGAAAGAAGTGGACGTGAATGAAAATGAAGAACATCCAGAAGGAAGTACATGGGATTCTGATACCTGTGCAGTGGCAGCAGATTGTTTAGTAGATCTGTTCGTTAATTTTTTCAATGTAATAAGGTCTCAACTATCTGGCGTGGTGACGATTCTGACGGGGTTCATTAGGAGTCCGATCCATGGTCCTGCCAGCACAGGCGTCGCTGCACTAATGCGTTTGGCAGGCGACTTGGGTACCAGGCTTACCGAAAACGAGTGGAGAGAAATTTTTCTTGCTTTGAAGGAAGCGGCGACAATTACCGTGCCTGGGTTTATGAAGGTCCTGAGAACCATGGATGATGTCAACGTTCCTGGGATTTCTCAATCTTATTATGATGGGGATGTGGCTTCTGATCAAGATTTGTCAACTGATGGTCTTGACGAGGACGATTTGCAAATGGCCTCCTACATAGTTTCTAGAATGAAGAGTCATATCTCAATGCAACTCCTCGTCATACAGGTCATTACTGATTTGTACAAGACCCATACCCAACCTTTCTCAGAAGCCAACATTTCCATCATTCTTGAGATCTTTTCATCCATTGCCACACATGCCCAGAAACTGAGTTCCAACACAATCCTTCAGAAGAAGCTACATAAAGCTTGCTCCATCCTGGAGATATCCGACCCGCCTGTGGTTCACTTCGAAAACGAGTCTTATCAGAGCTACCTCAACTTTCTTCAGAATATGCTTGCGGATCATCCCTTACTGACAAGTACAACTCTTATAGAATCTGAAGTTGTCACAGTATGCGAACAAATTTTGCATATTTACTTGAAGTGCACCGGGTCACCGGTTGAGCGGAAAGTAACCAACCAGCCTGTACTACATTGGATTCTTCCTTTGGGGTCAGTAAAGAAGGAAGAACTGGCTGCTCGAACGTCTCTAGTTGTCTCGGCATTGCAGGTTCTATCCGGGTTCGAAAGAGATATATTTAAAAGGTATGTTCCACAGCTTTTTCCATTGTTGGTAGAGCTTGTAAGGAGTGAACATAGCTCTGGAGAAGTTCAGGTTGTTTTGAGCAGCATATTTCAATTATGTATAGGCCCAATAATTATGCAATAA 5133 42.88 MSVSQTLGGSSRCGRAIGPSLDKIVKNAAWRKHSHLVSSCKSVLDKLDSIAEASPPDPTSPLAGLSPTDADFVLQPLLFALDAAYVKVAEPALECVFKLFSRGLFRGEIERPDGEAISGPGSIVYKIVESVCKSGGLGDEGVELTVLRVLLSAVRCPCVLIRGDCLVNVVRTCYNVYLGGLSGTNQICAKSVLGQIMVVVFSRVEEDSMDVPTRIISVSELLEFTDKNLNEGNSIYFCQNFINEVMDASEGIAEKKLYSFSAQLQNGNASPLKTENKGESDVGETEDGAESVGCSKIREDGFHLFKNLCKLSMKFSSPEHPDDHILLRGKILSLELLKVVMDNAGPVWRSNERFLNAIKQFLCLSLLKNSALSAMAIFQLQCCIFTSLLTKFRSGLKAEIGIFFPMLVLRVLENVLQPSFLQKMTVLNLLDKISQDPQIMVDIFVNYDCDVDSPNIFERIVNGLLKTALGPPSGSTTTLSPAQDVTFRHESVKCLVSIIKSMGTWMDQQLKLDDALLKASENDASPENPLSGEETAAVDSELHPDGNSESSDAATLEQRRAYKIELQKGISLFNRKPSRGIEFLISTKKVGGSPEEVASFLKNNNGLNETVIGDYLGEREEFPLKVMHAYVDSFNFKVMDFGEAIRFFLRGFKLPGEAQKIDRIMEKFAERYCKCNPGSFTSADTAYVLAYSVIMLNTDAHNNMVKDKMTKADFIRNNRGIDDGKDIPDEYLGALYDQIVRNEIKMNSDSSASQSKQATSINKLLGLDGILNLVSWKPTEEKAVGANGLLIRHIQEQFKAKSGKSESIYHAVTDATILRFMVEVCWGPMLAAFSVTLDQSDDKLATSLCLLGFRHAVHVTAVMGLQTQRDAFVTSMAKFTYLHCAADMKQKNVEAVKAIISIAIEDGNFLQEAWEHIFTCLSRIEHLQLLGEGAPPDASFLTSSNIETEEKALKSVGLSSLKKKGGLQNPAVMAVVRGGSYDSTSLGAKSTGLVTPEQINHLISNLNLLDQIGNFELNHVFAHSQSLNSEAIVAFVKALCKVAIAELQSPTDPRVFSLTKLVEVAHYNMNRIRLVWSRMWNVLSDFFVSVGLSENLSVAIFVMDSLRQLAMKFLEREELANYNFQNEFLRPFVIVMQKSGSTEIRELIVRCISQMVLSRVNNVKSGWKSVFMVFTAAAADERKNIVLLAFETMEKIVREYFPYITETETTTFTDCVRCLITFTNSRFNSDVSLNAIAFLRFCAVKLAEGGLVCYEMAGDNGSSNSPDAPPPPPTDKDDYASYWVPLLAGLSKLTSDPRSPIRKSSLEVLFNILKDHGHLFSRQFWVGVINTVVFPIFSSLHDKKEVDVNENEEHPEGSTWDSDTCAVAADCLVDLFVNFFNVIRSQLSGVVTILTGFIRSPIHGPASTGVAALMRLAGDLGTRLTENEWREIFLALKEAATITVPGFMKVLRTMDDVNVPGISQSYYDGDVASDQDLSTDGLDEDDLQMASYIVSRMKSHISMQLLVIQVITDLYKTHTQPFSEANISIILEIFSSIATHAQKLSSNTILQKKLHKACSILEISDPPVVHFENESYQSYLNFLQNMLADHPLLTSTTLIESEVVTVCEQILHIYLKCTGSPVERKVTNQPVLHWILPLGSVKKEELAARTSLVVSALQVLSGFERDIFKRYVPQLFPLLVELVRSEHSSGEVQVVLSSIFQLCIGPIIMQ 1710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3270876 3283905 - Hsped.02g03450.1 Hepe02g0345 561846

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0345 1710 MobiDBLite consensus disorder prediction 521 554 - -
Hepe02g0345 1710 Pfam Mon2/Sec7/BIG1-like, dimerisation and cyclophilin-binding domain 20 207 IPR032629 -
Hepe02g0345 1710 SUPERFAMILY ARM repeat 243 1204 IPR016024 -
Hepe02g0345 1710 Pfam C-terminal region of Mon2 protein 1276 1346 IPR032817 -
Hepe02g0345 1710 SMART sec7_5 559 744 IPR000904 GO:0005085(InterPro)|GO:0032012(InterPro)
Hepe02g0345 1710 FunFam Brefeldin A-inhibited guanine nucleotide-exchange 1 637 755 - -
Hepe02g0345 1710 PANTHER GUANYL-NUCLEOTIDE EXCHANGE FACTOR 17 1654 - GO:0005802(PANTHER)
Hepe02g0345 1710 Pfam Sec7 domain 563 744 IPR000904 GO:0005085(InterPro)|GO:0032012(InterPro)
Hepe02g0345 1710 Pfam Mon2/Sec7/BIG1-like, HUS domain 298 456 IPR032691 -
Hepe02g0345 1710 ProSiteProfiles SEC7 domain profile. 555 742 IPR000904 GO:0005085(InterPro)|GO:0032012(InterPro)
Hepe02g0345 1710 Gene3D - 1102 1324 IPR011989 -
Hepe02g0345 1710 FunFam Brefeldin A-inhibited guanine nucleotide-exchange protein 1 547 635 - -
Hepe02g0345 1710 SUPERFAMILY Sec7 domain 559 750 IPR035999 GO:0005085(InterPro)|GO:0032012(InterPro)
Hepe02g0345 1710 Pfam Mon2/Sec7/BIG1-like, HDS 1112 1194 IPR015403 -
Hepe02g0345 1710 Gene3D - 637 757 IPR023394 -
Hepe02g0345 1710 SUPERFAMILY ARM repeat 1023 1703 IPR016024 -
Hepe02g0345 1710 CDD Sec7 562 744 IPR000904 GO:0005085(InterPro)|GO:0032012(InterPro)
Hepe02g0345 1710 Gene3D - 546 636 - -
Hepe02g0345 1710 Pfam BIG2 C-terminal domain 1503 1701 IPR046455 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0345 K18442 - - csv:101212521 3042.68
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0345 Hepe-Chr2:3270876 Hepe05g1879 Hepe-Chr5:69105500 0.0 dispersed
Hepe02g0345 Hepe-Chr2:3270876 Hepe05g1842 Hepe-Chr5:68725159 3.78e-265 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g315 . . . . . Bpe12g00159 . . . Cmo11g01803 . . . . Sed05g2136 Cpe04g00646 Cpe15g00658 Bhi05g01542 Tan02g0540 Cmetu01g0851 Lac12g0438 Hepe02g0345 . . . . . . . . . . . . . . Csa07g00216 . . . Blo13g00462 . . . . . . . . . Cma11g01317 Cma19g00818 Car11g01430 Car19g00635 . . . . . . . . . . . . . . . . Lsi11g01311 . Chy01g00565 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010065 0 1 1 0 1 1 2 1 1 1 1 1 1 1 1 2 1 2 2 1 1 1 1 1 1 1 1 2 1 1 33