Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0359 ATGAGAGAGGTTGAAGGAAGAAGGGTTTGTCAGGAGTTTTCAGCTGGGTATTACGGTCTTTGTACTGTTGGAGGAATGCTTAGTGCTGGAACAACCCATCTTGCTATTACACCTCTTGATGTTTTGAAGGTCAATATGCAGGTTAATCCAATCAAGTACAATGGCATTTCTTCTGGTTTTTCTACTCTTTGGAGGGAGCAAGGTCCTTCATCTCTTTGGAGAGGTTGGTCAGGCAAGTTATTCGGGTATGGCGTTCAAGGCGGGTTCAAATTCGGTCTCTATGAGTACTTTAAGAAGTTTTACTCTGATTTGCTGGAAGGCCAAGGCCATAGCAGAAGTTCCATATACTTTCTCAGCAGTGCTTCTGCTCAAGTTTTTGCTGATGTTGCTCTCTGTCCTTTTGAAGCTGTCAAGGTCAGAGTCCAAACACAACCCTATTACGCCAAGGGGTTGGCCGATGGGTTTCCGAAGTTATACTACAGTGAAGGTCTTGCAGGTTTCTACAGAGGGCTTTTTCCACTTTGGGGACGAAATCTTCCATTCTCCATGATTATGTTCTCGACATTTGAGCATTCTGTGGACTTCATATATCAAAATATCATTCAGCGTAGAAAGGAAGATTGCTCGAGAACCCAACAGCTCGGTATTACATGTTTAGCTGGCTATGCAGCAGGAGCTGTTGGTACTGTTGTCTCAAATCCAGCTGATAACATTGTTTCCTCTCTTTATAATAAGAAGGCTGATAGTATAGTGCAGGCAGTGAAGAACATAGGGTTTAGCAATCTATTTACTAGAAGCCTTCCTGTCAGAATTACACTTGTTGGTCCTGTTGTTACTTTGCAGTGGTTCTTCTATGACACCATTAAAGTTCTAAGTGGACTGCCAACTAGTGGAGGGAGGGCTCAGGCAATTGGAAGAAGCAAAACTATCAACTTAGAGCTTTCTGGTGAAGGGCAGCATTGTTCAGTTCACACTTGA 978 43.15 MREVEGRRVCQEFSAGYYGLCTVGGMLSAGTTHLAITPLDVLKVNMQVNPIKYNGISSGFSTLWREQGPSSLWRGWSGKLFGYGVQGGFKFGLYEYFKKFYSDLLEGQGHSRSSIYFLSSASAQVFADVALCPFEAVKVRVQTQPYYAKGLADGFPKLYYSEGLAGFYRGLFPLWGRNLPFSMIMFSTFEHSVDFIYQNIIQRRKEDCSRTQQLGITCLAGYAAGAVGTVVSNPADNIVSSLYNKKADSIVQAVKNIGFSNLFTRSLPVRITLVGPVVTLQWFFYDTIKVLSGLPTSGGRAQAIGRSKTINLELSGEGQHCSVHT 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3367072 3371897 - Hsped.02g03590.1 Hepe02g0359 561860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0359 325 Pfam Mitochondrial carrier protein 114 197 IPR018108 -
Hepe02g0359 325 Pfam Mitochondrial carrier protein 22 102 IPR018108 -
Hepe02g0359 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 111 195 IPR018108 -
Hepe02g0359 325 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 8 300 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Hepe02g0359 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 16 100 IPR018108 -
Hepe02g0359 325 Gene3D Mitochondrial carrier domain 21 293 IPR023395 -
Hepe02g0359 325 FunFam Mitochondrial phosphate carrier protein 1, mitochondrial 19 292 - -
Hepe02g0359 325 SUPERFAMILY Mitochondrial carrier 21 287 IPR023395 -
Hepe02g0359 325 ProSiteProfiles Solute carrier (Solcar) repeat profile. 212 291 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0359 Hepe-Chr2:3367072 Hepe02g1660 Hepe-Chr2:22470011 5.06e-107 dispersed
Hepe02g0359 Hepe-Chr2:3367072 Hepe02g2492 Hepe-Chr2:71495839 3.02e-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0359 K15102 - csv:101219895 562.762