Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0361 ATGAATATGGTTTGGCTCCTTTTATTACTCCTTTATATTCAAGGGATTTCAGAAGGGGCCTCAAGACCTGAGGTAGTGAAAGTTGGAGCTATATTTTCACTTAGTTCTGTCAATGGGAAAGTGTCCAAGATTGCCATAGAGGCTGCTGAGAAAGATGTGAATTCTGATCCAAGTGTTCTTGGTGGAAGAAAGCTATCTATATCCATACATGATGCAAATTACAGTGGATTTCTTGGTATCACAGGAGCAATGAAGTACATGGTGTCTGACACGGTTGCTATCCTTGGTCCACAAGATGCTACAATGGCACATATACTCTCACATCTTTCTAACGAACTCCATGTCCCATTACTATCATTTACAGCATTGGACCCGACACTTTCGACTTTGCAGTATCCATACTTCATTCAAACAGCTCCAAATGATCAATTCCAGATGACTGCAATTGCAGAAATGATTGATTATTATGGTTGGCACGACGTAGTCGTTGTTTTCACTGATGATGATCAATGTCGAAATGGTATGATTGCATTAGGTGATAAACTTGAAGAGAGAGGCTTGAAAATTTCCTCTAAAGTGGCACTTCCCCCTTACCCAACAGCAACTAGAACTCAAGTTCAAGATGCACTGGTAAAGATCAAAATGATGGAATCTCGAGTCATAGTATTATACACGATCTCGAAAACAGGTTTCCTGGTTTTTGAAGTGGCTCAAAGCCTTAGAATGATGGAAGCTGGATATGTTTGGATAGCCTCTAGTTGGCTGTCAACAGTAATGGATTCTACTTCACCACTTCCCTTGAAAACTGCCAACTCCATCCAAGGAGTTCTTACGCTTCGTCTGCACACGCCCGATTCGAAAAGAAAGCAATCTTTTGTATCTAGTTGGAACAAGCTGAGTAATGGATCCATTGGATTGAATACTTATGGCTTATATGCATATGATACTGTTTGGATGATTGCAAAAGGAGTAAAAGAGTTATTTGATCAAAATGGCAACATCTCATTCTCCAAAGATACAAGTGTTGGTAGTCTTGGTGGAGAGCGCTTGGATTTTAGTTCACTAGGCATTTTTAATGAAGGAAAGCAGCTGCTTAACAATTTATTGAACATTAGCATGACTGGTCTGACAGGGCCTGTTCAGTTTATAGATAGATCCCCTTTACATCCTTCATATGATATCTTAAATGTTGTGAAATCTGGTATGAAGAGAATTGGTTATTGGTCCAACTATTCCGGGTTATCTGTCGTGGCGCCAGAAACGTTGTATGGAAAAGCAGCTAATCGGTCTACGTCCACCCAACAGTTAAGCAGCACGGTGTGGCCCGGGGGATCGACAATAAAGCCTCGTGGTTGGGTTCTTCCACTCGATGGAAGACGGTTAAGAATTGGCGTTCCACGCAGAGTTAGTTATCAGGAATTTGTGACACCAGGAGATGATAATGGCACAGTCAAAGGATACTGCATTGATGTGTTCACTGCTGCCATCAATTTGCTTCCATATGCAGTGAATTATGAGTTCATTTTGTTTGGAAATGGTGAGGAGAATCCTAGCTACTCTGAGCTTGTAAATAATGTTGCATTGAAAGAATTTGATGCTGCTGTTGGTGACATTGCAATTGTGACTAGTCGGACAAGGATCGTCGACTTTACGCAACCTTATATCGACTCAGGGCTAGTAGTGCTGGCCCTTGTCAAGAAATTGAATTCAAGTCCTTTGGCATTCCTTCGCCCATTCACACCAATGATGTGGGTTGTCACAGCAGCCTTTTTCTTCCTCATTGGATTAGTTGTGTGGATTTTGGAACATCGAAAAAACGAAGAATTCCGAGGACATCCTAGGACGCAAATTGCCACAATCCTCTGGTTTGGCTTCTCTACTATGTTTTTTTCACAAAGAGAAAATGTGGTGAGCACACTTGGACGTTTCGTGCTTATCGTGTGGCTTTTCGTGGTTCTAATAATCAACTCGAGCTACACGGCTGGTTTGACGTCGATATTCACGGTACAACAGCTAGCCTCACCTATAACAGGAATTGATTCATTGATAACTAGCAATGTAGCTATAGGATTCCAAGTTGGTTCGTTTGCTGAAAGTTATTTAAGAGAGCAACTTAACATCCAAAAGTCTAGGCTCATTGCTCTTGGATCCCCAGAAGAGTATGCTGCTGCCCTCGAGAACGGAACGGTCGGCGCTATTGTTGATGAACAACCATACATCGATCTCTTTCTCACCGAGCATTGCGATTTTTCGACTAGGGGCCAACAGTTCACCAAAAGTGGATGGGGATTTGCATTTCCACGAGACTCGCCGTTGGCGGCGGACTTATCGACGGCGATACTGACTCTATCTGAGAACGGCCATCTTCAAAAGATTCACGATAAGTGGTTCTCAAGAAGGTCTTGCAGTTCCGAAGATTCTGATTTAGAACAACTTCACTTACAGAGTTTCATCGGACTATTCTTCATTTGCGCCGGCGTATGTTTATTTGCTCTTCTGCTACATTTTTGCTACACGATGTGCCAATTCAACCGCCATTTGAAACGAGATCCACAACCTTCCACTTCCAACTCCGGCAGTGGCGGCGTTTCTGGTTCTAGTTCTAGTTCTAGCCCTACGCGTCTGAAGAAATTCTTGGCGTTTGCAGACGAAAAGAAGGAGCGAAAGACGACGACCAATTCCAAAAGAAAGGTCGATGATACATTCTCGAGTGAACGTCGAGAGGATTTTGCTAATTGA 2739 42.61 MNMVWLLLLLLYIQGISEGASRPEVVKVGAIFSLSSVNGKVSKIAIEAAEKDVNSDPSVLGGRKLSISIHDANYSGFLGITGAMKYMVSDTVAILGPQDATMAHILSHLSNELHVPLLSFTALDPTLSTLQYPYFIQTAPNDQFQMTAIAEMIDYYGWHDVVVVFTDDDQCRNGMIALGDKLEERGLKISSKVALPPYPTATRTQVQDALVKIKMMESRVIVLYTISKTGFLVFEVAQSLRMMEAGYVWIASSWLSTVMDSTSPLPLKTANSIQGVLTLRLHTPDSKRKQSFVSSWNKLSNGSIGLNTYGLYAYDTVWMIAKGVKELFDQNGNISFSKDTSVGSLGGERLDFSSLGIFNEGKQLLNNLLNISMTGLTGPVQFIDRSPLHPSYDILNVVKSGMKRIGYWSNYSGLSVVAPETLYGKAANRSTSTQQLSSTVWPGGSTIKPRGWVLPLDGRRLRIGVPRRVSYQEFVTPGDDNGTVKGYCIDVFTAAINLLPYAVNYEFILFGNGEENPSYSELVNNVALKEFDAAVGDIAIVTSRTRIVDFTQPYIDSGLVVLALVKKLNSSPLAFLRPFTPMMWVVTAAFFFLIGLVVWILEHRKNEEFRGHPRTQIATILWFGFSTMFFSQRENVVSTLGRFVLIVWLFVVLIINSSYTAGLTSIFTVQQLASPITGIDSLITSNVAIGFQVGSFAESYLREQLNIQKSRLIALGSPEEYAAALENGTVGAIVDEQPYIDLFLTEHCDFSTRGQQFTKSGWGFAFPRDSPLAADLSTAILTLSENGHLQKIHDKWFSRRSCSSEDSDLEQLHLQSFIGLFFICAGVCLFALLLHFCYTMCQFNRHLKRDPQPSTSNSGSGGVSGSSSSSSPTRLKKFLAFADEKKERKTTTNSKRKVDDTFSSERREDFAN 912
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3381094 3385954 - Hsped.02g03610.1 Hepe02g0361 561862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0361 912 CDD GluR_Plant 459 797 - -
Hepe02g0361 912 MobiDBLite consensus disorder prediction 850 912 - -
Hepe02g0361 912 MobiDBLite consensus disorder prediction 850 875 - -
Hepe02g0361 912 FunFam Glutamate receptor 698 801 - -
Hepe02g0361 912 FunFam Glutamate receptor 456 572 - -
Hepe02g0361 912 SUPERFAMILY Periplasmic binding protein-like II 438 798 - -
Hepe02g0361 912 Gene3D - 455 571 - -
Hepe02g0361 912 Gene3D - 141 414 - -
Hepe02g0361 912 MobiDBLite consensus disorder prediction 878 912 - -
Hepe02g0361 912 Pfam Bacterial extracellular solute-binding proteins, family 3 470 582 IPR001638 -
Hepe02g0361 912 Gene3D - 44 389 - -
Hepe02g0361 912 Pfam Receptor family ligand binding region 43 399 IPR001828 -
Hepe02g0361 912 Gene3D - 572 712 - -
Hepe02g0361 912 SMART GluR_14 462 799 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Hepe02g0361 912 FunFam Glutamate receptor 572 702 - -
Hepe02g0361 912 Pfam Ligand-gated ion channel 799 827 IPR001320 GO:0015276(InterPro)|GO:0016020(InterPro)
Hepe02g0361 912 SUPERFAMILY Periplasmic binding protein-like I 20 452 IPR028082 -
Hepe02g0361 912 PIRSF IGluLR_plant 1 911 IPR017103 -
Hepe02g0361 912 FunFam Glutamate receptor 141 301 - -
Hepe02g0361 912 Gene3D - 724 804 - -
Hepe02g0361 912 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 26 892 IPR015683 GO:0005886(PANTHER)|GO:0015276(PANTHER)|GO:0038023(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0361 Hepe-Chr2:3381094 Hepe04g1674 Hepe-Chr4:71943103 0.0 dispersed
Hepe01g2354 Hepe-Chr1:88051313 Hepe02g0361 Hepe-Chr2:3381094 0.0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0361 K05387 - csv:101208602 1476.46