Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0374 | ATGAATGCAGATATCAACTCCGTCGTCGCTATTGCCAGTAGCAGCAGTACCGCTCCGCCGGACCTCGCTTTTCCATATAAACTCCGACTGGTCGAAACCATTTCCGCCTCCAAGCGCCGCCGCGTTAATCCGCTCAAGAAGCGCTCCAGAATCGACAACGACTCCACCTCCAAGGCTAAGTATAGCAAGAAGCCCGATCCTAACGCGCCGAAGATCACTCCTCCGTGTACTGAGTGCGGGAGGAAATTCTGGTCGGATAAGGCGCTTTTCGGTCACATGAGGTGTCATCCAGAACGACAATGGCGGGGGATTAATCCGCCGCTTAGTTTCCGTCGTCCGATTTCGGTTTCTCCTTTTAGCCCTAATTTCGAAGAATCGGCGATTACGGAAGAGGATCAAGACATTGCTAATTGCTTGATACTCCTTGCGAATGGCCCTAATTTCATCGATGGGGTTTCCGATTGTCGATTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGATCGCACCAGGCGCTCGGTGGACATAGGGCAAGTCACAAGAATGTGAAAGGCTGTTTCGCCATAGCAAAGAGCGATGAAGAAACTGACGACGATGATTCTCTGTTAGGGCATTGCGGCCATGGAAGGAGCAACAGCAATCTGGAGAATCAAATGTCGATGGTTTTGGGAACAGGGCATCAATGTAGTATATGTATGAAGGTTTTTTCAAGTGGTCAAGCACTTGGTGGGCATAAGAGACGCCATTGGGAGAGAATAATGGAGGGGAATGCAACTACAGAAGAAGATGGTTATGCTAATTTTGACCTGAACATGCCTGCTCCTGTTGAAGATGATGATTCTTCTTCATATTCTTCAGGAATCACTCTGGATCTCAGGTTGGGCCTTTAA | 888 | 48.76 | MNADINSVVAIASSSSTAPPDLAFPYKLRLVETISASKRRRVNPLKKRSRIDNDSTSKAKYSKKPDPNAPKITPPCTECGRKFWSDKALFGHMRCHPERQWRGINPPLSFRRPISVSPFSPNFEESAITEEDQDIANCLILLANGPNFIDGVSDCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIAKSDEETDDDDSLLGHCGHGRSNSNLENQMSMVLGTGHQCSICMKVFSSGQALGGHKRRHWERIMEGNATTEEDGYANFDLNMPAPVEDDDSSSYSSGITLDLRLGL | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3488423 | 3489310 | - | Hsped.02g03740.1 | Hepe02g0374 | 561875 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0374 | 295 | PANTHER | ZINC FINGER PROTEIN ZAT2-RELATED | 35 | 293 | - | - | |
Hepe02g0374 | 295 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 226 | 248 | IPR013087 | - | |
Hepe02g0374 | 295 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 157 | 184 | IPR013087 | - | |
Hepe02g0374 | 295 | SUPERFAMILY | beta-beta-alpha zinc fingers | 226 | 250 | IPR036236 | - | |
Hepe02g0374 | 295 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 74 | 101 | IPR013087 | - | |
Hepe02g0374 | 295 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 159 | 179 | IPR013087 | - | |
Hepe02g0374 | 295 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 76 | 96 | IPR013087 | - | |
Hepe02g0374 | 295 | SUPERFAMILY | beta-beta-alpha zinc fingers | 75 | 179 | IPR036236 | - | |
Hepe02g0374 | 295 | MobiDBLite | consensus disorder prediction | 47 | 65 | - | - | |
Hepe02g0374 | 295 | Gene3D | Classic Zinc Finger | 154 | 248 | - | - | |
Hepe02g0374 | 295 | SMART | c2h2final6 | 157 | 179 | IPR013087 | - | |
Hepe02g0374 | 295 | SMART | c2h2final6 | 226 | 248 | IPR013087 | - | |
Hepe02g0374 | 295 | SMART | c2h2final6 | 74 | 96 | IPR013087 | - | |
Hepe02g0374 | 295 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 228 | 248 | IPR013087 | - | |
Hepe02g0374 | 295 | Pfam | C2H2-type zinc finger | 76 | 98 | IPR013087 | - | |
Hepe02g0374 | 295 | Pfam | C2H2-type zinc finger | 156 | 180 | IPR013087 | - | |
Hepe02g0374 | 295 | Pfam | C2H2-type zinc finger | 226 | 250 | IPR013087 | - | |
Hepe02g0374 | 295 | MobiDBLite | consensus disorder prediction | 39 | 72 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0374 | Hepe-Chr2:3488423 | Hepe05g2084 | Hepe-Chr5:71358146 | 3.80e-23 | dispersed | |
Hepe02g0374 | Hepe-Chr2:3488423 | Hepe08g0342 | Hepe-Chr8:3080511 | 1.86e-80 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54957 | PF13912 | zf-C2H2_6 | 1.60E-10 | CL0361 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0374 | - | - | - | 0.0 |