Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0374 ATGAATGCAGATATCAACTCCGTCGTCGCTATTGCCAGTAGCAGCAGTACCGCTCCGCCGGACCTCGCTTTTCCATATAAACTCCGACTGGTCGAAACCATTTCCGCCTCCAAGCGCCGCCGCGTTAATCCGCTCAAGAAGCGCTCCAGAATCGACAACGACTCCACCTCCAAGGCTAAGTATAGCAAGAAGCCCGATCCTAACGCGCCGAAGATCACTCCTCCGTGTACTGAGTGCGGGAGGAAATTCTGGTCGGATAAGGCGCTTTTCGGTCACATGAGGTGTCATCCAGAACGACAATGGCGGGGGATTAATCCGCCGCTTAGTTTCCGTCGTCCGATTTCGGTTTCTCCTTTTAGCCCTAATTTCGAAGAATCGGCGATTACGGAAGAGGATCAAGACATTGCTAATTGCTTGATACTCCTTGCGAATGGCCCTAATTTCATCGATGGGGTTTCCGATTGTCGATTCGAATGCTCGAGTTGCAAGAAAGTGTTCGGATCGCACCAGGCGCTCGGTGGACATAGGGCAAGTCACAAGAATGTGAAAGGCTGTTTCGCCATAGCAAAGAGCGATGAAGAAACTGACGACGATGATTCTCTGTTAGGGCATTGCGGCCATGGAAGGAGCAACAGCAATCTGGAGAATCAAATGTCGATGGTTTTGGGAACAGGGCATCAATGTAGTATATGTATGAAGGTTTTTTCAAGTGGTCAAGCACTTGGTGGGCATAAGAGACGCCATTGGGAGAGAATAATGGAGGGGAATGCAACTACAGAAGAAGATGGTTATGCTAATTTTGACCTGAACATGCCTGCTCCTGTTGAAGATGATGATTCTTCTTCATATTCTTCAGGAATCACTCTGGATCTCAGGTTGGGCCTTTAA 888 48.76 MNADINSVVAIASSSSTAPPDLAFPYKLRLVETISASKRRRVNPLKKRSRIDNDSTSKAKYSKKPDPNAPKITPPCTECGRKFWSDKALFGHMRCHPERQWRGINPPLSFRRPISVSPFSPNFEESAITEEDQDIANCLILLANGPNFIDGVSDCRFECSSCKKVFGSHQALGGHRASHKNVKGCFAIAKSDEETDDDDSLLGHCGHGRSNSNLENQMSMVLGTGHQCSICMKVFSSGQALGGHKRRHWERIMEGNATTEEDGYANFDLNMPAPVEDDDSSSYSSGITLDLRLGL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3488423 3489310 - Hsped.02g03740.1 Hepe02g0374 561875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0374 295 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 35 293 - -
Hepe02g0374 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 226 248 IPR013087 -
Hepe02g0374 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 157 184 IPR013087 -
Hepe02g0374 295 SUPERFAMILY beta-beta-alpha zinc fingers 226 250 IPR036236 -
Hepe02g0374 295 ProSiteProfiles Zinc finger C2H2 type domain profile. 74 101 IPR013087 -
Hepe02g0374 295 ProSitePatterns Zinc finger C2H2 type domain signature. 159 179 IPR013087 -
Hepe02g0374 295 ProSitePatterns Zinc finger C2H2 type domain signature. 76 96 IPR013087 -
Hepe02g0374 295 SUPERFAMILY beta-beta-alpha zinc fingers 75 179 IPR036236 -
Hepe02g0374 295 MobiDBLite consensus disorder prediction 47 65 - -
Hepe02g0374 295 Gene3D Classic Zinc Finger 154 248 - -
Hepe02g0374 295 SMART c2h2final6 157 179 IPR013087 -
Hepe02g0374 295 SMART c2h2final6 226 248 IPR013087 -
Hepe02g0374 295 SMART c2h2final6 74 96 IPR013087 -
Hepe02g0374 295 ProSitePatterns Zinc finger C2H2 type domain signature. 228 248 IPR013087 -
Hepe02g0374 295 Pfam C2H2-type zinc finger 76 98 IPR013087 -
Hepe02g0374 295 Pfam C2H2-type zinc finger 156 180 IPR013087 -
Hepe02g0374 295 Pfam C2H2-type zinc finger 226 250 IPR013087 -
Hepe02g0374 295 MobiDBLite consensus disorder prediction 39 72 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0374 Hepe-Chr2:3488423 Hepe05g2084 Hepe-Chr5:71358146 3.80e-23 dispersed
Hepe02g0374 Hepe-Chr2:3488423 Hepe08g0342 Hepe-Chr8:3080511 1.86e-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54957 PF13912 zf-C2H2_6 1.60E-10 CL0361 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0374 - - - 0.0