Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0384 ATGCTCCTCCTCCTCCCTCTCCTCCTCCTCCTCTCTCTCATCTCTTCCGCCACTGCCTGTGATAGTTGTGTTCATCAAGCCAAAGCCGCCTTCTACCAAGACGAGCCCGCCGGAGCATATAGAGGCGCTTGTGGCTATGGCGATCTGACATTGGAGCTCTCAAATGGCTACTTCTCCGCCATCATGCCTCCTCTTTACAAATACGGCGCTGCCTGTGGCGCCTGTTTTCAAGTAAGGTGTAAAAATGAGAAACTTTGCAGCAAAGAAGGGACCAAAATTGTTGTGACAGATCGAAATGACAACACTTATACAGGATTGGTTCTTAGCCAAAAGGCTTTTGGTGAAATGGCTGTAAGTGGAAAAGATGGATTGCTTCTGAGTTATGGGGTTGTAGACGTGGAATTCAAGAGGATTCCTTGTGAACACAAGAATAGAAACTTGTTGGTTAGAGTGGAAGAGTGGAGTCAATATCCCAATTTCCTAGCCATTAAATTGCTTTACCAAGGTGGCCAAACAGAAATAGTAGCCATGGATATAGCTCAGGTCGGTTACTCAAATTGGGATTATATGGGTAGGAACTATGGAGCTGTGTGGGAGACTAAAAGACCAGTACCAAAAGGACCATTGCAGTTGCGATTTGTGGTGACCTCTGGATATGATGGAAAGTGGATTTGGGCAAAGTACGTTTTTCCTGCTGATTGGAGACCTGGGTTGATTTACGACACTGGAGTTCAAATCTACGACATTGCCAAAGAAGGTTGTCCAGCAGATCAATGTGGCGATGTGCAATGGAGACGATAA 801 45.82 MLLLLPLLLLLSLISSATACDSCVHQAKAAFYQDEPAGAYRGACGYGDLTLELSNGYFSAIMPPLYKYGAACGACFQVRCKNEKLCSKEGTKIVVTDRNDNTYTGLVLSQKAFGEMAVSGKDGLLLSYGVVDVEFKRIPCEHKNRNLLVRVEEWSQYPNFLAIKLLYQGGQTEIVAMDIAQVGYSNWDYMGRNYGAVWETKRPVPKGPLQLRFVVTSGYDGKWIWAKYVFPADWRPGLIYDTGVQIYDIAKEGCPADQCGDVQWRR 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3667574 3669167 - Hsped.02g03840.1 Hepe02g0384 561885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0384 266 Gene3D - 11 141 IPR036908 -
Hepe02g0384 266 Pfam Lytic transglycolase 60 134 IPR009009 -
Hepe02g0384 266 SUPERFAMILY PHL pollen allergen 145 241 IPR036749 -
Hepe02g0384 266 SUPERFAMILY Barwin-like endoglucanases 9 143 IPR036908 -
Hepe02g0384 266 PANTHER EXPANSIN-B3 8 248 - GO:0009505(PANTHER)|GO:0009506(PANTHER)
Hepe02g0384 266 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 41 145 IPR007112 -
Hepe02g0384 266 PRINTS Expansin/Lol pI family signature 40 58 IPR007118 GO:0005576(InterPro)
Hepe02g0384 266 PRINTS Expansin/Lol pI family signature 128 144 IPR007118 GO:0005576(InterPro)
Hepe02g0384 266 PRINTS Expansin/Lol pI family signature 62 80 IPR007118 GO:0005576(InterPro)
Hepe02g0384 266 PRINTS Expansin/Lol pI family signature 228 242 IPR007118 GO:0005576(InterPro)
Hepe02g0384 266 PRINTS Expansin/Lol pI family signature 187 201 IPR007118 GO:0005576(InterPro)
Hepe02g0384 266 Pfam Expansin C-terminal domain 151 231 IPR007117 -
Hepe02g0384 266 Gene3D - 142 247 IPR036749 -
Hepe02g0384 266 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 159 242 IPR007117 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0384 Hepe-Chr2:3667574 Hepe09g1194 Hepe-Chr9:14748265 1.29e-85 dispersed
Hepe02g0384 Hepe-Chr2:3667574 Hepe02g0385 Hepe-Chr2:3679225 1.31e-64 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0384 - - - 0.0