Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0385 ATGGTTCTTGGGCATCCAGCTTCTTTAATGGAGTACACCTTGCAGTTGTTGTTCCTTTCCTTTATAAAGATGGAGCTCGATGTGGCGCTTGCTACCAGTAATAAAACTGGTTTTGTTTTGAGTAAGAAAGCTTTCTCTGCAATGGCTCAAAAGGCCAAAGGAATGCAGATTCTCAAACAAGGGATTGTAGATGTTGAATATAAAAGGAATGAAATTGGGAGTAGTGGTAGAAAGACAATAAAAAACCGAGACCATATTCGATCGAAATGGCCAGCTGGGGCTTGTGGCTATGGCTCATTAGCACTTGGCTTCCTCGATGGACACCTCGCTGCGGGTGTCCCTTCCCTTTACAAAGACGGTGTTCGTTGTGGCGCCTGCTATCAGATAAGGTGCAAGGACAAGAAAGTTTGCAGAAGAAGCGGGACGAAAGTGATTTTGAGTGATCTGAATTTACAAAGCAATAAAAGTGATTTTATTTTGAGTAAGAAAGCTTTCTCTGCCATGGCTCAGAGGGGTCAAGATAAGAATATTTTGAAACGTGGGAGTCTGGATGTTGAATACAAGAGGATGCCTTGTGAATACAAAAAACAAAATTTGTCAGTAAGAATTGAAGAATCAAGCAAAAAGCCACATCAGATGGCTGTTAAGTTCCTATACCAAGGTGGGCAGACAGATATTGTATTGGTTCACCTTCATCCGGTGGGTTCGGGAAGGACGGTGTTGATGAGCAGAAGGCATGGGACGGCGGTGTGGGAAATAGACACGGCGGTGGAAGAGGCGGTGGTGTTTCAGATAAGGGTGATTTCGGGGTTCGACGGGATGTGGGTCAGGGCGGAGCAGGCGGTTCCGGCGGACTGGAAGGCGGGGATGATCTACGACCTTGGAGTTGAGATGGATGCCATAATTGCGAAAGGACAAGAGAGTTGCAAAAAGTGCGATGAAGGGCATTGGTGA 954 45.81 MVLGHPASLMEYTLQLLFLSFIKMELDVALATSNKTGFVLSKKAFSAMAQKAKGMQILKQGIVDVEYKRNEIGSSGRKTIKNRDHIRSKWPAGACGYGSLALGFLDGHLAAGVPSLYKDGVRCGACYQIRCKDKKVCRRSGTKVILSDLNLQSNKSDFILSKKAFSAMAQRGQDKNILKRGSLDVEYKRMPCEYKKQNLSVRIEESSKKPHQMAVKFLYQGGQTDIVLVHLHPVGSGRTVLMSRRHGTAVWEIDTAVEEAVVFQIRVISGFDGMWVRAEQAVPADWKAGMIYDLGVEMDAIIAKGQESCKKCDEGHW 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3679225 3684956 - Hsped.02g03850.1 Hepe02g0385 561886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0385 317 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 92 197 IPR007112 -
Hepe02g0385 317 PRINTS Expansin/Lol pI family signature 113 131 IPR007118 GO:0005576(InterPro)
Hepe02g0385 317 PRINTS Expansin/Lol pI family signature 280 294 IPR007118 GO:0005576(InterPro)
Hepe02g0385 317 PRINTS Expansin/Lol pI family signature 91 109 IPR007118 GO:0005576(InterPro)
Hepe02g0385 317 PRINTS Expansin/Lol pI family signature 180 196 IPR007118 GO:0005576(InterPro)
Hepe02g0385 317 PANTHER EXPANSIN-B3 33 71 - -
Hepe02g0385 317 SUPERFAMILY Barwin-like endoglucanases 84 195 IPR036908 -
Hepe02g0385 317 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 211 294 IPR007117 -
Hepe02g0385 317 Pfam Lytic transglycolase 110 187 IPR009009 -
Hepe02g0385 317 SUPERFAMILY PHL pollen allergen 198 293 IPR036749 -
Hepe02g0385 317 Pfam Expansin C-terminal domain 201 283 IPR007117 -
Hepe02g0385 317 Gene3D - 73 192 IPR036908 -
Hepe02g0385 317 Gene3D - 25 71 IPR036908 -
Hepe02g0385 317 SUPERFAMILY Barwin-like endoglucanases 34 70 IPR036908 -
Hepe02g0385 317 Gene3D - 193 294 IPR036749 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0385 Hepe-Chr2:3679225 Hepe09g1194 Hepe-Chr9:14748265 8.92e-46 dispersed
Hepe02g0384 Hepe-Chr2:3667574 Hepe02g0385 Hepe-Chr2:3679225 1.31e-64 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0385 - - - 0.0