Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0385 | ATGGTTCTTGGGCATCCAGCTTCTTTAATGGAGTACACCTTGCAGTTGTTGTTCCTTTCCTTTATAAAGATGGAGCTCGATGTGGCGCTTGCTACCAGTAATAAAACTGGTTTTGTTTTGAGTAAGAAAGCTTTCTCTGCAATGGCTCAAAAGGCCAAAGGAATGCAGATTCTCAAACAAGGGATTGTAGATGTTGAATATAAAAGGAATGAAATTGGGAGTAGTGGTAGAAAGACAATAAAAAACCGAGACCATATTCGATCGAAATGGCCAGCTGGGGCTTGTGGCTATGGCTCATTAGCACTTGGCTTCCTCGATGGACACCTCGCTGCGGGTGTCCCTTCCCTTTACAAAGACGGTGTTCGTTGTGGCGCCTGCTATCAGATAAGGTGCAAGGACAAGAAAGTTTGCAGAAGAAGCGGGACGAAAGTGATTTTGAGTGATCTGAATTTACAAAGCAATAAAAGTGATTTTATTTTGAGTAAGAAAGCTTTCTCTGCCATGGCTCAGAGGGGTCAAGATAAGAATATTTTGAAACGTGGGAGTCTGGATGTTGAATACAAGAGGATGCCTTGTGAATACAAAAAACAAAATTTGTCAGTAAGAATTGAAGAATCAAGCAAAAAGCCACATCAGATGGCTGTTAAGTTCCTATACCAAGGTGGGCAGACAGATATTGTATTGGTTCACCTTCATCCGGTGGGTTCGGGAAGGACGGTGTTGATGAGCAGAAGGCATGGGACGGCGGTGTGGGAAATAGACACGGCGGTGGAAGAGGCGGTGGTGTTTCAGATAAGGGTGATTTCGGGGTTCGACGGGATGTGGGTCAGGGCGGAGCAGGCGGTTCCGGCGGACTGGAAGGCGGGGATGATCTACGACCTTGGAGTTGAGATGGATGCCATAATTGCGAAAGGACAAGAGAGTTGCAAAAAGTGCGATGAAGGGCATTGGTGA | 954 | 45.81 | MVLGHPASLMEYTLQLLFLSFIKMELDVALATSNKTGFVLSKKAFSAMAQKAKGMQILKQGIVDVEYKRNEIGSSGRKTIKNRDHIRSKWPAGACGYGSLALGFLDGHLAAGVPSLYKDGVRCGACYQIRCKDKKVCRRSGTKVILSDLNLQSNKSDFILSKKAFSAMAQRGQDKNILKRGSLDVEYKRMPCEYKKQNLSVRIEESSKKPHQMAVKFLYQGGQTDIVLVHLHPVGSGRTVLMSRRHGTAVWEIDTAVEEAVVFQIRVISGFDGMWVRAEQAVPADWKAGMIYDLGVEMDAIIAKGQESCKKCDEGHW | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3679225 | 3684956 | - | Hsped.02g03850.1 | Hepe02g0385 | 561886 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0385 | 317 | ProSiteProfiles | Expansin, family-45 endoglucanase-like domain profile. | 92 | 197 | IPR007112 | - | |
Hepe02g0385 | 317 | PRINTS | Expansin/Lol pI family signature | 113 | 131 | IPR007118 | GO:0005576(InterPro) | |
Hepe02g0385 | 317 | PRINTS | Expansin/Lol pI family signature | 280 | 294 | IPR007118 | GO:0005576(InterPro) | |
Hepe02g0385 | 317 | PRINTS | Expansin/Lol pI family signature | 91 | 109 | IPR007118 | GO:0005576(InterPro) | |
Hepe02g0385 | 317 | PRINTS | Expansin/Lol pI family signature | 180 | 196 | IPR007118 | GO:0005576(InterPro) | |
Hepe02g0385 | 317 | PANTHER | EXPANSIN-B3 | 33 | 71 | - | - | |
Hepe02g0385 | 317 | SUPERFAMILY | Barwin-like endoglucanases | 84 | 195 | IPR036908 | - | |
Hepe02g0385 | 317 | ProSiteProfiles | Expansin, Cellulose-binding-like domain profile. | 211 | 294 | IPR007117 | - | |
Hepe02g0385 | 317 | Pfam | Lytic transglycolase | 110 | 187 | IPR009009 | - | |
Hepe02g0385 | 317 | SUPERFAMILY | PHL pollen allergen | 198 | 293 | IPR036749 | - | |
Hepe02g0385 | 317 | Pfam | Expansin C-terminal domain | 201 | 283 | IPR007117 | - | |
Hepe02g0385 | 317 | Gene3D | - | 73 | 192 | IPR036908 | - | |
Hepe02g0385 | 317 | Gene3D | - | 25 | 71 | IPR036908 | - | |
Hepe02g0385 | 317 | SUPERFAMILY | Barwin-like endoglucanases | 34 | 70 | IPR036908 | - | |
Hepe02g0385 | 317 | Gene3D | - | 193 | 294 | IPR036749 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0385 | Hepe-Chr2:3679225 | Hepe09g1194 | Hepe-Chr9:14748265 | 8.92e-46 | dispersed | |
Hepe02g0384 | Hepe-Chr2:3667574 | Hepe02g0385 | Hepe-Chr2:3679225 | 1.31e-64 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0385 | - | - | - | 0.0 |