Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0398 ATGGTTATGGAGGATAACGAGAGCTGTGGGAGTAGAGCGTACGACTCGTTATCGCCGGCGCAGAGTCGTCAACAGAGGCAGAAGTTTGAGGTCTACAATGAGGTTTTACGCCGTCTGAAGGATTCAAACAACGACGAGGCTATTCAGCCTGGTTTTGACGACGAACTATGGCTTCACTTCAATCGCCTTCCTACTCGATATGCTCTAGACGTAAATGTGGAGAGGGCAGAAGATGTTCTCATTCATAAAAGATTATTGCAAGTTGCGCACGATCCTGCAAATCGACCTGCAATTGAAGTCCGCCTAGTGCAGGTCCAAGCCGTTTCTGATGGGAATTCAGCTGATCTTGCTGATTCATATCATGTAAAAGACACTGATCATAATTCTCCAAATTCCTTGAGCAGACAGAGCATACATCCACCACCTGCCTTTGGGTCATCTCCTAACCTTGAAGCCCTGGCCCTTGAAGCTAATAACGATCAGGATCTGGAGGTTGATCATTCTGTACATGCCAGAACACAGTTTTTCCGGCCGATGCATGAAATAACTTTCTCTACGGATGACAAGCCAAAACTTCTCAGTCAGTTGACTTCCTTGCTTGCGGAGATTGGGCTGAACATCCAGGAGGCACATGCATTTTCCACTGTTGACGGTTACTCCTTGGACGTTTTTGTAGTTGATGGTTGGCCCTATGAGGAAACAGAGCGATTGAAGACTGCATTAGAGAAGGAAGTCTTACAGGTTCAGAGGCAGGCTTGGCCAAATCGTAAATCCTCATCTCCTGTAGGGCAACGCGATATATCAGTTAAATGTGAACCTGACCGGGTGGAAATACCCACAGATGGTACTGATGTATGGGAAATTAATCCTAGACATCTGAAGTTTGAGCATAAAGTTGCATCTGGGTCATATGGAGATCTGTATAAAGGTACATACTGCAGTCAGGAAGTGGCTATTAAAATCCTTAAACCTGAACGTGTGAATTCAGATATGCAAAGTGAGTTTGCCCAGGAGGTATACATTATGAGAAAAGTCAGGCATAAGAATGTCGTACAGTTTATAGGTGCATGTACTAAGCCCCCAAGCTTGTGCATTGTAACAGAATTTATGTCTGGTGGTAGTGTCTATGACTATCTACATAAACAAAAGGGCACTTTTAGGCTTCCATCTTTGCTCAAGGTAGCCATTGATGTCTCCAAGGGAATGAACTACTTGCACCAAAATAATATCATTCACAGAGATCTAAAGGCCGCCAATCTTCTAATGGATGAAAATGAAGTTGTCAAGGTTGCTGATTTCGGTGTTGCAAGAGTGAAATCTCAATCAGGAGTTATGACTGCAGAAACTGGGACTTATCGTTGGATGGCTCCTGAGGTTATTGAACACAAACCCTATGATCATAAGGCTGATGTTTTCAGTTTCGCAATTGTCTTGTGGGAGCTGCTAACCGGAAAGCTACCCTATGAATTCCTTACCCCATTACAAGCTGCAGTGGGAGTGGTACAAAAGGGTTTACGGCCTACTATTCCTAAGCACACTAATCCCAAACTGACTGAGTTGCTAGAAAAATGTTGGCAGCAAGACCCGTCATGCAGGCCCGACTTCTCTGAAATTATCGATATATTGTTGCCGATCTCTAAGGAAGTAAGTTCCCGATGA 1659 44.24 MVMEDNESCGSRAYDSLSPAQSRQQRQKFEVYNEVLRRLKDSNNDEAIQPGFDDELWLHFNRLPTRYALDVNVERAEDVLIHKRLLQVAHDPANRPAIEVRLVQVQAVSDGNSADLADSYHVKDTDHNSPNSLSRQSIHPPPAFGSSPNLEALALEANNDQDLEVDHSVHARTQFFRPMHEITFSTDDKPKLLSQLTSLLAEIGLNIQEAHAFSTVDGYSLDVFVVDGWPYEETERLKTALEKEVLQVQRQAWPNRKSSSPVGQRDISVKCEPDRVEIPTDGTDVWEINPRHLKFEHKVASGSYGDLYKGTYCSQEVAIKILKPERVNSDMQSEFAQEVYIMRKVRHKNVVQFIGACTKPPSLCIVTEFMSGGSVYDYLHKQKGTFRLPSLLKVAIDVSKGMNYLHQNNIIHRDLKAANLLMDENEVVKVADFGVARVKSQSGVMTAETGTYRWMAPEVIEHKPYDHKADVFSFAIVLWELLTGKLPYEFLTPLQAAVGVVQKGLRPTIPKHTNPKLTELLEKCWQQDPSCRPDFSEIIDILLPISKEVSSR 552
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3817020 3825407 + Hsped.02g03980.1 Hepe02g0398 561899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0398 552 MobiDBLite consensus disorder prediction 116 142 - -
Hepe02g0398 552 MobiDBLite consensus disorder prediction 11 26 - -
Hepe02g0398 552 PANTHER SERINE-THREONINE PROTEIN KINASE 37 543 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Hepe02g0398 552 MobiDBLite consensus disorder prediction 126 142 - -
Hepe02g0398 552 Gene3D Phosphorylase Kinase; domain 1 283 371 - -
Hepe02g0398 552 CDD ACT_TyrKc 179 246 - -
Hepe02g0398 552 MobiDBLite consensus disorder prediction 1 26 - -
Hepe02g0398 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 410 422 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 FunFam Serine/threonine-protein kinase isoform 1 283 371 - -
Hepe02g0398 552 ProSiteProfiles Protein kinase domain profile. 293 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 SUPERFAMILY ACT-like 179 243 IPR045865 -
Hepe02g0398 552 ProSiteProfiles ACT domain profile. 181 259 IPR002912 -
Hepe02g0398 552 SMART serkin_6 293 546 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 CDD STKc_MAP3K-like 299 542 - -
Hepe02g0398 552 Coils Coil 231 251 - -
Hepe02g0398 552 SUPERFAMILY Protein kinase-like (PK-like) 276 542 IPR011009 -
Hepe02g0398 552 PRINTS Tyrosine kinase catalytic domain signature 469 491 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 PRINTS Tyrosine kinase catalytic domain signature 367 380 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 PRINTS Tyrosine kinase catalytic domain signature 404 422 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 PRINTS Tyrosine kinase catalytic domain signature 450 460 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 PRINTS Tyrosine kinase catalytic domain signature 513 535 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0398 552 Gene3D Transferase(Phosphotransferase) domain 1 372 551 - -
Hepe02g0398 552 FunFam serine/threonine-protein kinase HT1 372 552 - -
Hepe02g0398 552 Pfam Protein tyrosine and serine/threonine kinase 293 541 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0398 Hepe-Chr2:3817020 Hepe08g2053 Hepe-Chr8:57646493 1.79e-81 dispersed
Hepe02g2786 Hepe-Chr2:76680066 Hepe02g0398 Hepe-Chr2:3817020 2.47e-130 transposed
Hepe01g2309 Hepe-Chr1:87687402 Hepe02g0398 Hepe-Chr2:3817020 9.00e-240 wgd
Hepe02g0398 Hepe-Chr2:3817020 Hepe06g0891 Hepe-Chr6:56192594 2.77e-273 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72527 PF07714 PK_Tyr_Ser-Thr 3.80E-74 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0398 - - - 0.0