Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0410 ATGTTTTCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCGGCCGAGCTCCGATCGGTTTGTGGGTGGGGATATTAAGGGGCGAAAGGACGGGCTGCTGTGGTACAAAGATAGTGGACAACACTTGAATGGTGAGTTCTCAATGTCTGTGGTTCAGGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGAAGTTTGAGTTTAGACGAGTCGGGTCCGAGAGGGACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCAGAGACTTCTCGGTATATCTGTGATCATCTCTTCCAGAATCTCAAGAGATTTACTTCTGAGCAAGATTCAATGTCTGCCGATGTAATACGCAAGGCATTCCAAGCGACAGAAGATGGTTTTCTTTCTATAGTCCGAAGACAATGGTCAACAAATCCACAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGTTGGGACTCTCTATATTGCAAATCTAGGTGATTCACGTGCTGTTTTGGGTAGAGTAGTGAAAGCAACCGGTGAGGTTCTAGCCATTCAGTTATCAACAGAGCACAATGTTTCTAACGAGTCTGAGAGGCAAGAGCTGCAATCTTTGCACCCTGAAGACTCACAAGTTGTGGTTTTAAAGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCTATAGGCGATGTGTACTTGAAAAAAGCTGAGTTCAATAGAGAACCTCTGTATGTAAAGTTTCGAGTTCGAGAACCCTTCAAAAAGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGACCCAATTGAAGCCAGATGATCAATTTGTTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAATCAGGAAGCAGTGGATATAGTTCATAACCATTCTCAAAAAGGAAGTGCAAAAAGACTTGTCAAAACTGCTCTTCAAATAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGACTTGAAGAAGATTGACCGTGGTGTTCGTCGCCATTTCCATGATGACATCACTGTGGTGGTTGTGTTTCTCGATTCAAATCTGCTCTTCAGAGCCAGCTCCACAAAGAGCTTGAGTGTCTCACTACGAGGGGGTGGAGTCAACCGGCTTCCTAACTCTTTAGCGGTAGAACCTGGAAATCCCTGA 1173 44.25 MFSELMNFLRACFRPSSDRFVGGDIKGRKDGLLWYKDSGQHLNGEFSMSVVQANNLLEDQSQIESGSLSLDESGPRGTFVGVYDGHGGPETSRYICDHLFQNLKRFTSEQDSMSADVIRKAFQATEDGFLSIVRRQWSTNPQIAAVGSCCLVGVICVGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESERQELQSLHPEDSQVVVLKHNVWRVKGIIQISRSIGDVYLKKAEFNREPLYVKFRVREPFKKPFLSSEPAISETQLKPDDQFVIFASDGLWEHLSNQEAVDIVHNHSQKGSAKRLVKTALQIAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLLFRASSTKSLSVSLRGGGVNRLPNSLAVEPGNP 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3911144 3916448 - Hsped.02g04100.1 Hepe02g0410 561911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0410 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g0410 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Hepe02g0410 390 CDD PP2Cc 46 353 IPR001932 -
Hepe02g0410 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Hepe02g0410 390 Gene3D - 35 361 IPR036457 -
Hepe02g0410 390 ProSiteProfiles PPM-type phosphatase domain profile. 45 353 IPR001932 -
Hepe02g0410 390 SMART PP2C_4 37 351 IPR001932 -
Hepe02g0410 390 FunFam Phosphatase 2C family protein 34 363 - -
Hepe02g0410 390 Pfam Protein phosphatase 2C 72 320 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0410 Hepe-Chr2:3911144 Hepe04g1630 Hepe-Chr4:71680648 2.97e-207 dispersed
Hepe02g0410 Hepe-Chr2:3911144 Hepe06g0898 Hepe-Chr6:56257293 2.01e-198 wgd
Hepe02g0410 Hepe-Chr2:3911144 Hepe08g0307 Hepe-Chr8:2764993 6.20e-225 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0410 - - - 0.0