Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0419 ATGTCGAAAGAGGTGACTGAAGAGGGACAGTCCGGCCTCAGAAAGGACTACGTCGACCCACCGCCGGCGCCGCTCATCGACGTCGCCGAACTCACCCTCTGGTCCTTCTACAGAGCCCTAATCGCCGAATTCATCGCTACTCTCCTCTTCCTCTACGTCACCATCGCCACCGTCATCGGCAACAACAAACAGACCAAACCATGCGACGGCGTCGGAATCCTCGGAATCGCCTGGGCCTTCGGCGGCATGATCTTCGTCCTCGTCTACTGCACCGCCGGAATCTCCGGCGGTCACATTAATCCGGCGGTCACATTCGGGCTGTTCTTGGCAAGGAAGGTGTCGCTGATCAGAGCGGTGGGGTACATGGTGGCGCAATGCGCCGGAGCCATCGTCGGAGTTGGGTTGGTTAAGGCGTTTATGAAGCATGATTACGACAACAACGGCGGCGGAGCGAACTCCGTTAACAGTGGCTACAGTAGGGGAACGGCTCTTGGAGCTGAGATCATTGGGACATTTGTTCTTGTTTACACTGTCTTCTCTGCTACTGATCCCAAGAGAAGCGCACGTGACTCGCACATCCCTGTTTTGGCTCCATTGCCCATTGGATTTGCCGTGTTCATCGTTCATTTGGCTACCATTCCGATCACCGGAACCGGCATCAACCCAGCTAGAAGCTTCGGCGCTGCCGTTATCTACAACCGTGAGAAGCCCTGGAACGACCACTGGATCTTTTGGGTCGGTCCGTTCGTCGGAGCATTGGCGGCGGCGGCGTACCACCAGTACATTCTCCGGGCAGCCGCCATTAAAGCTTTGGGATCTTTCCGAAGCAACCCCACCAACTGA 843 56.58 MSKEVTEEGQSGLRKDYVDPPPAPLIDVAELTLWSFYRALIAEFIATLLFLYVTIATVIGNNKQTKPCDGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVGYMVAQCAGAIVGVGLVKAFMKHDYDNNGGGANSVNSGYSRGTALGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFIVHLATIPITGTGINPARSFGAAVIYNREKPWNDHWIFWVGPFVGALAAAAYHQYILRAAAIKALGSFRSNPTN 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3998850 4000247 - Hsped.02g04190.1 Hepe02g0419 561920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0419 280 Pfam Major intrinsic protein 31 259 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 SUPERFAMILY Aquaporin-like 30 264 IPR023271 -
Hepe02g0419 280 FunFam Probable aquaporin PIP1-2 23 278 - -
Hepe02g0419 280 ProSitePatterns MIP family signature. 98 106 IPR022357 -
Hepe02g0419 280 Gene3D Glycerol uptake facilitator protein. 23 280 IPR023271 -
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 38 57 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 166 184 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 202 224 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 80 104 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 117 136 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PRINTS Major intrinsic protein family signature 242 262 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 CDD MIP 38 262 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Hepe02g0419 280 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 8 276 IPR034294 GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER)
Hepe02g0419 280 NCBIfam MIP family channel protein 42 258 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0419 Hepe-Chr2:3998850 Hepe08g0886 Hepe-Chr8:8024237 5.54e-154 dispersed
Hepe02g0419 Hepe-Chr2:3998850 Hepe08g0300 Hepe-Chr8:2705016 2.09e-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0419 K09872 - csv:101209627 551.592