Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0426 ATGGACGACGGGGAGCTTGATTTTTCCAATCATGAAGTGTTTTCTAGCCCTAATATGGAGCTTCCAAGCAGTTGCTCAATGGATAGTTTCTTTGAGGATCTTCTCAAGGACACTCATACTTGTACTCATACTCATACTTGCAATCCACCGGGCCCTGATTACTCTCATACCCACACATGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCAGATGAAGAAGACAAGGTTGTTACTGATGACACTGCGGAATCGAACGAGAAGATGTCGAAGAAACGCCCGTCGGGTAACCGGGAAGCTGTTCGTAAGTATCGCGAGAAGAAGAAGGCTAGGGCCGCCTCATTGGAAGATGAGGTTGTTAGATTGAGGACTTTGAATCAGCATTTGATGAAGAGGTTGCAGGGGCAGGCTGCATTGGAGGCTGAGGTTGCTAGGCTTAAGTGTTTGCTTGTGGATATTAGGGGCAGAATTGAAGGGGAGATTGGTTCTTTCCCTTACCAGAAAGCTGTTAACCCTAACTTGTCCAACTCAAGCATCCCTGGTGCTTATGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCCGGGGTCGATGGCAACAGAAACGGTGAAGGTGCTGTGATAAATGGTCAGAATTTTAGTGCTTGTGAATTTGAAAATCTTCAGTGTTTGGCAAATCATGACTCTGGATCGAAAGAGCTACCTGGGTGTGGGTTAGGGAATGCGGTTTCGAATGATATTTCTTCAGGAGCGACGAAGAAGAAAGGAGGAAGCCGCAGAGAGACATGGACCTGA 813 46.62 MDDGELDFSNHEVFSSPNMELPSSCSMDSFFEDLLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPDEEDKVVTDDTAESNEKMSKKRPSGNREAVRKYREKKKARAASLEDEVVRLRTLNQHLMKRLQGQAALEAEVARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNSSIPGAYVMNPCNMQCEDQVYCLHPGVDGNRNGEGAVINGQNFSACEFENLQCLANHDSGSKELPGCGLGNAVSNDISSGATKKKGGSRRETWT 270
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4083582 4086743 - Hsped.02g04260.1 Hepe02g0426 561927
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0426 270 PANTHER CCAAT/ENHANCER BINDING PROTEIN 1 182 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Hepe02g0426 270 MobiDBLite consensus disorder prediction 71 108 - -
Hepe02g0426 270 MobiDBLite consensus disorder prediction 71 103 - -
Hepe02g0426 270 Pfam Basic region leucine zipper 87 142 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0426 270 SUPERFAMILY Leucine zipper domain 92 135 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0426 270 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0426 270 Coils Coil 98 132 - -
Hepe02g0426 270 CDD bZIP 97 144 - -
Hepe02g0426 270 Gene3D - 76 153 - -
Hepe02g0426 270 SMART brlzneu 84 152 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0426 Hepe-Chr2:4083582 Hepe08g0294 Hepe-Chr8:2667962 2.79e-108 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54960 PF07716 bZIP_2 9.40E-13 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0426 K25785 - csv:101208161 495.352