Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0453 ATGTGGCTACAGAAAGGAAACAGTGTTAATGGAGGGAAAAAGGGAGGAGTTGGAGCATTTGCAGGAAATGGGTTAGTAGCTATTGCTATTGACAGGGAAAAAGGAAGCCAAAATGCTCTCAGATGGGCCGCCGAGCATTTGCTTGGAAAGGGCCAAACTGTGATTTTAATCCATGTAGTTCATAGACCTTCAAGTGCGGCGGCTTCTTTGATTGGGGAAGCCATTATTTGTAATGGTGATGGCAGTTTCACGGATGATTCCCCTCGTAAACAGCAGCTCGAAATGCAGACTAGAGACATTTTTCTCACCTTCCATTGCTATTGTACTCGCAAGGATATTCAATGCCTTGATGTTATATTGGAAGACACTGATATTGTGAAAGCATTAACGGAATACATCTCGTACACTGCAATCGACAACTTGGTGCTCGGGGCTCCGTCGAAACATGGATTTATTCGGTTTAAGTCATCGAGCATGGGGAGTAGCGTGTCGAAAGGGGCACCGGATTTTTGCAATGTATATGTCATCGCAAAGGGGAAGGTGTCGTCGTTGAAAAATGCCTCGCGCTCGGCTCCCTTTGGTTCCCCTCTGCTAGACTATATGCAGAAGTTATCTAAGCCGGTTATAAAGGCATCGCCCACTCCTCGACATAAGTTTAATTTAAGAGATAGGACATCATTCAAGCCTCGCAGTTATCAAGAGGAACCAATCAAGTCACCTTACTCCCAGGGAGGGGATAGAATTTCTATTTCCAAATTTAGTGGAGGGTTCTCCGAGTTAGAATCCGACATATCCTTCATAAGCTCCGGTAGACCAAGCACGGATCGCGCTTCTTCTGTTGCATTTGACTACTCTGATTCAGCCCCACCACGATTTTCAATCAGCTCAGAGCAAAGCTTTGCATCTCTACCATTTAAACCAAAATGGACAGACCTCAGTAATCTCAATGATTTCTCATCAGTTTCAGATGAGAGCTGCAGGACATCATGTTCCTGGTCTTCTCAAAACATGGATGAAGCAGAATTTGAAATGAGGAGGCTGAAGCTAGAGCTTAAACAAACTATGGAGATGTACAGTACAGCATGTAAAGAAGCACTAACAGCAAAGCAGAAGGCAATGGAACTACATAATTGGAGACGCGAAGAAGAACAAAAACTAGAAGAGGCACGACTTGCACAAGAAGCAGCAATGGCTATTGCAGAGCAGGAGAGAGCGAGATGCCGAGCGGCAATGGAGGCAGCTGATGCAGCTAAGAGGATTGCACAGTTAGAATCACATAAAAGAGCAAATCTAGAGATTAAAGCACTTAAAGAAGCAGAGGAAATGCAGAGAGCATTGAAAAATCTTGCACAAAGCGACATCAGATACAGGAGATATACAATTGAGGAGATTGAATCAGCAACAGAACATTTTGCACCATCTCGGAAGATTGGAGAAGGAGGTTATGGACCTGTCTTTCGTTGTCGTCTCGATCACACATCGGTTGCAGTCAAGGTTTTGCGTCCTGATGCGACTCAAGGAAGGACACAGTTTCAGCAAGAGATTGATATATTGAGTTGCATAAGGCATCCCAACATGGTACTTCTTCTAGGAGCATGCCCGGAATATGGCATTCTTGTGTACGAGCACATGTCCAACGGAAGTTTGGAGGATCGACTCTTCCGAAAGGGGAACACCCCTGTTATTCCATGGCAATATAGGTTTCGAATTGCTGCTGAGATTGCTACTGGTCTTCTGTTTCTCCACCAGACAAAACCAGAGCCGTTGGTGCACCGTGACCTCAAGCCAGCTAACATATTGCTAGACTACAACTATGTTAGCAAGATAAGCGACGTCGGTTTGGCTAGACTCGTACCTGCCGTGGCCGAAAATGTAACACAATGCTGCCAGACTTCGGCCGCTGGAACTTTCTGTTATATAGACCCTGAGTATCAACAAACTGGAATGCTTGGGGTTAAATCTGATGTGTATTCACTAGGTATCATGTTACTTCAACTAATTACGGCCAGGCCGCCCATGGGGTTGGCTCACCATGTTGGTCGTTCTATTGAGAAGGGGACTTTTGAGGAGTTCCTGGACCCAGCTGTGCTTGATTGGCCAGTGGAACAAGCACTTACCTTTGCAAAACTATCACTTGAATGTGCAGAACTTAGACGAAAAGACAGACCAGATCTTGGCACTGTTGTGTTGCCTGAACTTAGCAAATTGAGAGAATTTGGTGAGGAGAAAATGGAGCACATAGGGTCAGGGGATGGTAGTGGATCTTTCAGCGGTTTTAGCCAGTCCTCAATGGAGCAGGATGTAATGAGTGACCCTCAACTAATGATGACTTCAGAAAGTTCCAAGAGCCCATCTAGTGCATAA 2364 45.18 MWLQKGNSVNGGKKGGVGAFAGNGLVAIAIDREKGSQNALRWAAEHLLGKGQTVILIHVVHRPSSAAASLIGEAIICNGDGSFTDDSPRKQQLEMQTRDIFLTFHCYCTRKDIQCLDVILEDTDIVKALTEYISYTAIDNLVLGAPSKHGFIRFKSSSMGSSVSKGAPDFCNVYVIAKGKVSSLKNASRSAPFGSPLLDYMQKLSKPVIKASPTPRHKFNLRDRTSFKPRSYQEEPIKSPYSQGGDRISISKFSGGFSELESDISFISSGRPSTDRASSVAFDYSDSAPPRFSISSEQSFASLPFKPKWTDLSNLNDFSSVSDESCRTSCSWSSQNMDEAEFEMRRLKLELKQTMEMYSTACKEALTAKQKAMELHNWRREEEQKLEEARLAQEAAMAIAEQERARCRAAMEAADAAKRIAQLESHKRANLEIKALKEAEEMQRALKNLAQSDIRYRRYTIEEIESATEHFAPSRKIGEGGYGPVFRCRLDHTSVAVKVLRPDATQGRTQFQQEIDILSCIRHPNMVLLLGACPEYGILVYEHMSNGSLEDRLFRKGNTPVIPWQYRFRIAAEIATGLLFLHQTKPEPLVHRDLKPANILLDYNYVSKISDVGLARLVPAVAENVTQCCQTSAAGTFCYIDPEYQQTGMLGVKSDVYSLGIMLLQLITARPPMGLAHHVGRSIEKGTFEEFLDPAVLDWPVEQALTFAKLSLECAELRRKDRPDLGTVVLPELSKLREFGEEKMEHIGSGDGSGSFSGFSQSSMEQDVMSDPQLMMTSESSKSPSSA 787
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4392501 4398468 + Hsped.02g04530.1 Hepe02g0453 561954
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0453 787 Coils Coil 428 448 - -
Hepe02g0453 787 Gene3D Phosphorylase Kinase; domain 1 449 543 - -
Hepe02g0453 787 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 443 543 - -
Hepe02g0453 787 MobiDBLite consensus disorder prediction 742 787 - -
Hepe02g0453 787 SUPERFAMILY Protein kinase-like (PK-like) 453 729 IPR011009 -
Hepe02g0453 787 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0453 787 Gene3D HUPs 25 176 IPR014729 -
Hepe02g0453 787 Pfam Universal stress protein family 27 168 IPR006016 -
Hepe02g0453 787 MobiDBLite consensus disorder prediction 753 787 - -
Hepe02g0453 787 CDD STK_N 25 179 - -
Hepe02g0453 787 Coils Coil 337 357 - -
Hepe02g0453 787 Pfam Protein kinase domain 474 677 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0453 787 SMART serkin_6 471 730 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0453 787 ProSiteProfiles Protein kinase domain profile. 471 733 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0453 787 PANTHER OS02G0152300 PROTEIN 26 778 IPR051348 -
Hepe02g0453 787 FunFam Os07g0541700 protein 544 636 - -
Hepe02g0453 787 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 27 176 - -
Hepe02g0453 787 Coils Coil 375 403 - -
Hepe02g0453 787 Gene3D Transferase(Phosphotransferase) domain 1 544 749 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe01g2100 Hepe-Chr1:85625259 Hepe02g0453 Hepe-Chr2:4392501 3.46e-246 dispersed
Hepe02g0453 Hepe-Chr2:4392501 Hepe08g2061 Hepe-Chr8:57864274 7.72e-238 dispersed
Hepe02g0453 Hepe-Chr2:4392501 Hepe10g0326 Hepe-Chr10:3479889 9.29e-265 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72528 PF00069 Pkinase 2.60E-38 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0453 - - - 0.0