Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0459 ATGGGTGATACTGAAGATGTTAATACTGATAATATGCGAAATCTTCAATGTTCGTATGGAACATCTTCTTCTTCAGCTGGAAATCTTCCTTTCTCGATGGATCAACTTAAAATTTCCCAAATGAACTGCTCACAAATCCGTCCATCTCACTTTCAGTCAAATTTTCTTGGTGATAATAGTAGAAGAGTTGGGTTACCTCCCAGCCCCAACTCGCCGCAGATCCCACCAATTTCACCGTATTCTCAGATCCCGATCTCTCGTCCGATGAACCAGCCTAGTTATAACCAAGTGCCTAATCATTCTCGATCGTTGTCTCAGCCTTCTTTTTTCTCTCTTGATTCTTTGCCCCCTTTAAGCCCGTCTCCATTTCGTGAGTCCCCATCTACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATAACAGTTCACATTCTTTGTTGCCTCCCACACCTTATATGAGAGCCAATTCTTCTAAAATGGGAGATTCTTTACCTCCTCGTAAAGCACACAGGCGGTCTAGTAGTGATATTCCATTTGGATTATCTTCAATGATTCAGCCATCTCCTCTTCTCCCATTTAGCAGTAAAGAGAATGCTGGCATATTAAAGCCGGCCAGCCAGTTTGTTAAAAGAGAACTTAGTTTGGAGAAAAGTGTTGACAACAGTTTAGAAGGAATGGGTGAGAGGAAATCCGATGGGGACAGTGTGGATGACTTATTTTCTGCTTATATGAATTTGGATAATATTGATTTGTTCAACTCTTCTGGGACTAATGATAAGAATGGCCATGAGAATCGAGAGGATTTGGATAGTAGGGGTAGTGGAACAAAGACAAATGGGGGTGATAGCAGTGATAATGAGGCAGAAAGCAGTGTAAATGAAAGCGGGGATAATGCTCAAATGTCTGGATTGAATTCATCTGCTGAGAAGAGGGAAGGGATCAAGCGATCTGCGGGGGGAGATATTGCTCCAACTACCAGACATTACCGAAGTGTCTCCATGGATAGTTTCATGGGCAACTTGCAGTTTGGTGACGAGTCACCCAAAATGCCTCCTACACCACCCGGCGTTCGCCCAGGGCCACTTGTTGATGGTAATTCAGCTCCATTCAGCTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCCGAGATTGCTTTAACCGATCCCAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAGTCTGCTGCTCGATCAAAAGAACGAAAGATGCGGTATATATCTGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCTGCCCAACTCACACTTTTACAGAGAGATTCAGTTGGACTTACAAACCAGAATAATGAACTGAAGTTTCGTCTCCAAGCCATGGAACAACAAGCTCAACTACGGGATGCTCTAAATGAAGCCTTAACCGCGGAGGTTCAGAGACTGAAACTCGCTACAGCAGAGCTAAACGCACAGTCTCATCCCTCGAACGGAGTAATGCCCCAACCTTCCATCAATCACCATAGTCTCCAGCTTCAGCTTCAGCAACAGCAGCAGCACCACCACCAACAACAGCAACAACAGATGCAGCAAAATGGGAGTGGAACCACAAAACCAGAGTCCAAGCAATAA 1674 44.44 MGDTEDVNTDNMRNLQCSYGTSSSSAGNLPFSMDQLKISQMNCSQIRPSHFQSNFLGDNSRRVGLPPSPNSPQIPPISPYSQIPISRPMNQPSYNQVPNHSRSLSQPSFFSLDSLPPLSPSPFRESPSTSNSDQVSADTSMEDRDNSSHSLLPPTPYMRANSSKMGDSLPPRKAHRRSSSDIPFGLSSMIQPSPLLPFSSKENAGILKPASQFVKRELSLEKSVDNSLEGMGERKSDGDSVDDLFSAYMNLDNIDLFNSSGTNDKNGHENREDLDSRGSGTKTNGGDSSDNEAESSVNESGDNAQMSGLNSSAEKREGIKRSAGGDIAPTTRHYRSVSMDSFMGNLQFGDESPKMPPTPPGVRPGPLVDGNSAPFSLEFGNGEFSGAELKKIMANDKLAEIALTDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLTNQNNELKFRLQAMEQQAQLRDALNEALTAEVQRLKLATAELNAQSHPSNGVMPQPSINHHSLQLQLQQQQQHHHQQQQQQMQQNGSGTTKPESKQ 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4502107 4506008 - Hsped.02g04590.1 Hepe02g0459 561960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0459 557 MobiDBLite consensus disorder prediction 50 186 - -
Hepe02g0459 557 MobiDBLite consensus disorder prediction 258 332 - -
Hepe02g0459 557 MobiDBLite consensus disorder prediction 279 312 - -
Hepe02g0459 557 MobiDBLite consensus disorder prediction 523 557 - -
Hepe02g0459 557 Gene3D - 406 458 - -
Hepe02g0459 557 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 156 546 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe02g0459 557 SMART brlzneu 403 467 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0459 557 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 405 468 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0459 557 FunFam probable transcription factor PosF21 406 459 - -
Hepe02g0459 557 MobiDBLite consensus disorder prediction 83 115 - -
Hepe02g0459 557 Coils Coil 423 478 - -
Hepe02g0459 557 CDD bZIP_plant_RF2 408 457 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0459 557 MobiDBLite consensus disorder prediction 50 67 - -
Hepe02g0459 557 Pfam bZIP transcription factor 407 461 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0459 557 MobiDBLite consensus disorder prediction 1 30 - -
Hepe02g0459 557 SUPERFAMILY Leucine zipper domain 407 458 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0459 557 Coils Coil 486 506 - -
Hepe02g0459 557 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0459 Hepe-Chr2:4502107 Hepe05g1299 Hepe-Chr5:61089221 8.04e-43 dispersed
Hepe02g0459 Hepe-Chr2:4502107 Hepe02g0460 Hepe-Chr2:4512049 2.64e-299 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54965 PF00170 bZIP_1 8.20E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0459 - - - 0.0