Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0460 ATGGGTGATACTGAAGATGCTCATACTGATAACATACGAAATCTTCAATGTTCGTTTGGAACATCTTCCTCTTCTGCTGTAAAGCATCATTTCTCTCTGGATCAACTTAAAATTTCTCAAATGAACTGCTCACAAGGCCGTCCGCAGCATTTTCAGTCGAATTTTCTTGGGGATAATAATAATAATAGAAGAATTGGGATACCGCCTTGTCCAAACTCACCGCAGATGCCGCCAATCTCACCGTATTCTCAGATCCCGATATCCCGTCCCATGAACCAACAAAGTTATAACCCAGTTCCTACTCATTCTCGATCGTTATCTCAGCCTTCTTTTTTCTCTCTCGATTCTTTGCCCCCTTTAAGCCCATCTCCATTTCGTGATTCCCCATCAACATCGAATTCAGATCAGGTTTCTGCAGATACATCAATGGAGGATAGGGATGCGAGTTCACATTCTTTGTTGCCTCCCTCACCTTATATGCGGGCCAATTCTTCTAAGATGGGAGATGCTTTACCCCCACGTAAAGCACATAGGCGATCTAATAGTGATATTCCATTTGGATTATCTTCGATGATTCAGTCATCTCCTTTTCTCCCTTTAAGCGGCTCGGGTGGTTTGGAGCGATCGACAAGCAGTAAAGAGAATGCAGGCTTATTTAAGCCGGCCAGCCAGTTTGTTAAAAGAGAACCTAGTTTAGAAAAAAAGACTGATAACAATTTGGAAGGAATGGGTGAAAGGAAGTTCGAAGGGGATACTGTGGATGATCTATTCTCTGCTTATATGAATTTGGATAATATTGATTTCTTCAACTCTTCTGGGACGAATGACAAGAATGGTCATGAGAATCGGGAGGATTTGGATAGTAGGGGTAGTGTAACGAAGACAGGGGGTGACAGCAGTGACAATGAAGCAGAAAGCAGTGTAAATGAAAGTGGGGATAACACTCAAATGCCTGGATTGAATTCCTCTGCTGAGAAGAGGGAAGGGATCAAACGGACTGCGGGGGGAGATATTGCTCCAACTACCAGACATTACCGGAGTATCTCCATGGATAGTTTCATGGACAAGTTGCAGTTCGGTGATGAATCACCTAAAATGCCTCCTACACCACCTGGCGTTCGTCCAGGGCAACTTTCTCCAAACAACTTAGTTGATGGTAATTCAACTCCATTCAGCTTGGAGTTTGGTAATGGTGAGTTCAGTGGGGCTGAACTGAAGAAAATTATGGCAAATGACAAACTTGCTGAGATTGCACTAGCTGATCCTAAGCGTGCAAAGAGGATCTTGGCAAACCGTCAATCTGCTGCTCGATCGAAAGAACGAAAGATGCGGTATATATCCGAGTTGGAACACAAGGTTCAGACTCTTCAGACAGAAGCTACCACACTGTCTGCCCAACTCACACTTCTACAGCGAGACTCAGTTGGACTTGCAAACCAGAATAATGAGCTGAAGTTCCGTCTCCAGGCCATGGATCAGCAAGCACAATTACGGGAAGCTCTAAACGAAGCCTTAACTGCGGAGGTTCAGAGATTGAAGCTCGCTACGACTGACATAAATGCGCAATCTCGTCCCTCAAACGGGGTAATGAATCACCATGGACTCCAGCTCCAGCTTCAGCAGCACCAACAACAACAGCAACATATGCAGCAGAATCAGAATGGCAGTGCAACCACAAAGCCAGAGTCCAACCAATAA 1698 44.64 MGDTEDAHTDNIRNLQCSFGTSSSSAVKHHFSLDQLKISQMNCSQGRPQHFQSNFLGDNNNNRRIGIPPCPNSPQMPPISPYSQIPISRPMNQQSYNPVPTHSRSLSQPSFFSLDSLPPLSPSPFRDSPSTSNSDQVSADTSMEDRDASSHSLLPPSPYMRANSSKMGDALPPRKAHRRSNSDIPFGLSSMIQSSPFLPLSGSGGLERSTSSKENAGLFKPASQFVKREPSLEKKTDNNLEGMGERKFEGDTVDDLFSAYMNLDNIDFFNSSGTNDKNGHENREDLDSRGSVTKTGGDSSDNEAESSVNESGDNTQMPGLNSSAEKREGIKRTAGGDIAPTTRHYRSISMDSFMDKLQFGDESPKMPPTPPGVRPGQLSPNNLVDGNSTPFSLEFGNGEFSGAELKKIMANDKLAEIALADPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLANQNNELKFRLQAMDQQAQLREALNEALTAEVQRLKLATTDINAQSRPSNGVMNHHGLQLQLQQHQQQQQHMQQNQNGSATTKPESNQ 565
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4512049 4517134 - Hsped.02g04600.1 Hepe02g0460 561961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0460 565 Gene3D - 422 474 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 85 117 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 537 565 - -
Hepe02g0460 565 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 421 484 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0460 565 SUPERFAMILY Leucine zipper domain 423 474 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0460 565 SMART brlzneu 419 483 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0460 565 MobiDBLite consensus disorder prediction 45 68 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 183 218 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 360 379 - -
Hepe02g0460 565 Coils Coil 532 552 - -
Hepe02g0460 565 Coils Coil 439 473 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 277 291 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 70 84 - -
Hepe02g0460 565 CDD bZIP_plant_RF2 424 473 IPR044759 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0460 565 Pfam bZIP transcription factor 423 475 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Hepe02g0460 565 FunFam probable transcription factor PosF21 422 475 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 45 246 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 292 322 - -
Hepe02g0460 565 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 161 553 - GO:0003700(PANTHER)|GO:0005634(PANTHER)
Hepe02g0460 565 MobiDBLite consensus disorder prediction 227 246 - -
Hepe02g0460 565 MobiDBLite consensus disorder prediction 271 344 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0460 Hepe-Chr2:4512049 Hepe10g1972 Hepe-Chr10:56752364 1.81e-42 dispersed
Hepe02g0459 Hepe-Chr2:4502107 Hepe02g0460 Hepe-Chr2:4512049 2.64e-299 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54966 PF00170 bZIP_1 6.50E-09 CL0018 Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0460 - - - 0.0