Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0478 | ATGAAGATCCGTTGCGATGTTTGTGATCAAGCGGAGGCCTCTGTTTTTTGCTCTGCTGATGAAGCTGCTCTTTGCCATGGCTGCGATCTTCATGTTCATCGCGCTAATAAGCTCGCCGGAAAACACTCCAGATTCTCCCTACTTCATCCGATCAAATCGGATTCTCCTCTTTGCGATATCTGTCAGGAACGGCGCGCGCTTGTATTTTGTCAACAAGATAGGGCAATTCTTTGCAGAGAATGCGATATTTCGATCCACGAAGCGAACGAACATACGCAGAAGCACAGTCGATTTCTTCTCACAGGTGTGAAGCTTTCTTCGGCTTGTTTTTCTTACCAAACATCTTCGTCTTCCAATGGCTGTGATGCCGCCATGGATGTTAAAACTGGAAGCTCACACATCGCTTGCAGCAAGAGACCTAAAATGCCTGCGAATAACGAAATCTCGAGCTCTCATAATTCCGCTGAAAAACCTGCTCCGTCGTCGACGAGTAATTACAAAATCGAAGACGGCCAAGCAAGCGACGGCGGTTCGTTCTCGACGAGCAGCATATCGGAATATTTGGAGACACTGCCGGGATGGTGCGTGGAGGAGTTTCTCGATCCTTCCGCCGCCGCCGCCGCCGCCAATAGTTTCTGTAAGTTTAATGGCGGAATTCTGCAATTTGTGAATCAAAATCTGGAGAGGCAACAAGAATCATCGAAAGGGTCCATCAGATTTCGCAACACCTTGGAAATTTTAGGTAAATTTTCTCAAACTAGATCTTGGAATGGGGTTGGAATAATAATCTCCATGAAAATTACTCGTAGAGGTGAAAAAATGGCGTTGGTAGATCAGATTCAGATCATGATCATGATCATGAACACCAGCTTTGGCTACAAAACAATTCTGGTAAAAATAG | 901 | 45.62 | MKIRCDVCDQAEASVFCSADEAALCHGCDLHVHRANKLAGKHSRFSLLHPIKSDSPLCDICQERRALVFCQQDRAILCRECDISIHEANEHTQKHSRFLLTGVKLSSACFSYQTSSSSNGCDAAMDVKTGSSHIACSKRPKMPANNEISSSHNSAEKPAPSSTSNYKIEDGQASDGGSFSTSSISEYLETLPGWCVEEFLDPSAAAAAANSFCKFNGGILQFVNQNLERQQESSKGSIRFRNTLEILGKFSQTRSWNGVGIIISMKITRRGEKMALVDQIQIMIMIMNTSFGYKTILVKI | 300 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 4666861 | 4668167 | - | Hsped.02g04780.1 | Hepe02g0478 | 561979 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0478 | 300 | ProSiteProfiles | Zinc finger B-box type profile. | 1 | 47 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | FunFam | B-box zinc finger protein 21 | 1 | 98 | - | - | |
Hepe02g0478 | 300 | CDD | Bbox1_BBX-like | 5 | 47 | IPR049808 | - | |
Hepe02g0478 | 300 | ProSiteProfiles | Zinc finger B-box type profile. | 53 | 100 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | SMART | bboxneu5 | 4 | 47 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | SMART | bboxneu5 | 53 | 100 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | Pfam | B-box zinc finger | 3 | 46 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | Pfam | B-box zinc finger | 54 | 92 | IPR000315 | GO:0008270(InterPro) | |
Hepe02g0478 | 300 | MobiDBLite | consensus disorder prediction | 143 | 178 | - | - | |
Hepe02g0478 | 300 | CDD | Bbox1_BBX-like | 57 | 100 | IPR049808 | - | |
Hepe02g0478 | 300 | MobiDBLite | consensus disorder prediction | 134 | 178 | - | - | |
Hepe02g0478 | 300 | Gene3D | Classic Zinc Finger | 1 | 98 | - | - | |
Hepe02g0478 | 300 | PANTHER | B-BOX ZINC FINGER PROTEIN 22 | 1 | 227 | IPR051979 | GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009640(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe01g1643 | Hepe-Chr1:81637092 | Hepe02g0478 | Hepe-Chr2:4666861 | 6.17e-59 | dispersed | |
Hepe02g0478 | Hepe-Chr2:4666861 | Hepe07g0957 | Hepe-Chr7:12812874 | 7.33e-36 | dispersed | |
Hepe04g1574 | Hepe-Chr4:71240552 | Hepe02g0478 | Hepe-Chr2:4666861 | 5.03e-21 | transposed | |
Hepe10g0125 | Hepe-Chr10:1269043 | Hepe02g0478 | Hepe-Chr2:4666861 | 6.09e-55 | wgd | |
Hepe02g0478 | Hepe-Chr2:4666861 | Hepe08g0983 | Hepe-Chr8:9285986 | 4.48e-66 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54969 | PF00643 | zf-B_box | 5.00E-07 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0478 | - | - | - | 0.0 |