Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0485 ATGGTGAAGATGGGTGTTGTGGGGTTTTCTTTTTCTTCATGTTCTTCTCATTTTGCTGTGTTCATTGCTGTTCTGGTTCTGGTTTTGAATGGTGTGGAGGTCTGTAATGGAAGTAAAACAAGCCAGTTTTTGAGGAAGGTTGAGAAAACTGTGGATATGCCTCTTGATAGTGATGTTTTTGCTCTGCCTCCTGGTTATAATGCTCCCCAGCAGGTTCATATCACACAAGGAGATCACGAAGGGAAGGCAGTGATTGTTTCATGGGTCACTCCATATAAACCAGGATCAAATGAAGTATTATATTGGAGTGAGGAAAGCGAGGAAAAGAAACTGGCCTTTGGAAAAGTATATACTTACAAATTCTACAATTACACTTCTGGCTACATTCACCACTGCACCATTTCAAACTTAGAGTACAACACAAAATACTACTATGTAGTGGGAATTGGATACTCTCCAAGAACATTCTGGTTTTTCACTCCTCCAGAAGTCGGTCCCGATGTCCCCTATACATTTGGTCTCATAGGGGATCTTGGCCAGAGTTTTGATTCAAATACGACACTGACGCATTACGAACATAACCCGCATAAAGGACAAGCAGTGTTGTTTGTGGGGGACCTATCTTATGCTGATAACTATCCATTCCATGACAATGTAAGGTGGGATACATGGGGAAGATTCACAGAGAGAAGCATCGCTTATCAGCCTTGGATATGGACTGCAGGAAATCATGAAATTGATTTTATCCCAGAAATTGGCGAGACCGAGCCTTTCAAGCCATATACTCACCGTTATCACGTCCCTTATAAAGCATCCGGGAGCACATCTCCTTTTTGGTACTCAATCAAGAGAGGTCCTGCATACATCATAGTCTTGGCATCATATTCAGCTTATGGTAAATACACTCCTCAATACAAATGGCTGGAAGAAGAGTTCCCAAAAGTCAATAGAAGTGAAACACCATGGTTGATTGTTCTGATGCATTCCCCATGGTACAACAGCTACAACTATCATTACATGGAAGGAGAAACTATGCGAGTGATGTACGAGCCGTGGTTTGTACAATACAAAGTCGATGTCGTCTTTGCTGGTCATGTCCATGCCTATGAAAGATCTGAAAGAATTTCAAATGTTGCATACAACATTGTGAATGGCCTATGTGTTCCTGTGAAAGATCAATCTGCACCTGTATACGTAACAATAGGTGATGGAGGAAACATTGAAGGCCTAGCAACCAATATGACGGAGCCACAGCCTGCATACTCGGCGTATCGTGAAGCAAGTTTTGGCCATGCCATATTCGATATAAAGAACCGAACTCATGCGCATTTCAGTTGGAACAGGAATCAGGATGGATACGCGGTTGAAGCCGACTCTCTTTGGTTTCTCAACAGACACTGGTACCCGGTTGACGAGTCGTGGAGTGAACATAAATGA 1437 42.59 MVKMGVVGFSFSSCSSHFAVFIAVLVLVLNGVEVCNGSKTSQFLRKVEKTVDMPLDSDVFALPPGYNAPQQVHITQGDHEGKAVIVSWVTPYKPGSNEVLYWSEESEEKKLAFGKVYTYKFYNYTSGYIHHCTISNLEYNTKYYYVVGIGYSPRTFWFFTPPEVGPDVPYTFGLIGDLGQSFDSNTTLTHYEHNPHKGQAVLFVGDLSYADNYPFHDNVRWDTWGRFTERSIAYQPWIWTAGNHEIDFIPEIGETEPFKPYTHRYHVPYKASGSTSPFWYSIKRGPAYIIVLASYSAYGKYTPQYKWLEEEFPKVNRSETPWLIVLMHSPWYNSYNYHYMEGETMRVMYEPWFVQYKVDVVFAGHVHAYERSERISNVAYNIVNGLCVPVKDQSAPVYVTIGDGGNIEGLATNMTEPQPAYSAYREASFGHAIFDIKNRTHAHFSWNRNQDGYAVEADSLWFLNRHWYPVDESWSEHK 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4743815 4747974 + Hsped.02g04850.1 Hepe02g0485 561986

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0485 478 SUPERFAMILY Purple acid phosphatase, N-terminal domain 50 162 IPR008963 GO:0003993(InterPro)|GO:0046872(InterPro)
Hepe02g0485 478 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 165 473 - -
Hepe02g0485 478 Pfam Purple acid Phosphatase, N-terminal domain 69 151 IPR015914 GO:0003993(InterPro)|GO:0046872(InterPro)
Hepe02g0485 478 CDD MPP_PAPs 166 464 IPR041792 -
Hepe02g0485 478 Gene3D - 165 474 IPR029052 -
Hepe02g0485 478 Pfam Iron/zinc purple acid phosphatase-like protein C 395 454 IPR025733 -
Hepe02g0485 478 Pfam Calcineurin-like phosphoesterase 171 369 IPR004843 GO:0016787(InterPro)
Hepe02g0485 478 Gene3D - 68 164 - -
Hepe02g0485 478 FunFam Fe(3+)-Zn(2+) purple acid phosphatase 68 164 - -
Hepe02g0485 478 PANTHER ACID PHOSPHATASE RELATED 21 465 IPR039331 GO:0003993(InterPro)
Hepe02g0485 478 SUPERFAMILY Metallo-dependent phosphatases 166 467 IPR029052 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0485 K22390 - - csv:101211612 907.131
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0485 Hepe-Chr2:4743815 Hepe04g1562 Hepe-Chr4:71144117 5.19e-246 dispersed
Hepe02g0485 Hepe-Chr2:4743815 Hepe10g0598 Hepe-Chr10:7325502 5.95e-257 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1026 . . . . . . . . . . . . . . Sed04g3913 . . Bhi04g00213 Tan02g0773 Cmetu01g2623 . Hepe02g0485 . . Cla08g01452 Cam08g1937 Cec08g1511 Cco08g1650 Clacu08g1627 . Cre08g1413 . . . . . . . . Blo17g00768 . . . . . . Bma05g00144 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97