Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0511 ATGGCGGTTTCCGGTGCCAATTCCACGGAGATTCACCCCTCCGACGAATCATCATCTTCTTCTTCTGCTGTTTCCCAGACTTCGCTATCCAACTTCAAAATCTACGCCGCGATCGGTGTAATTGCTGCATGTTTGATTGCGGCTACTGCTTTGATCTTCCTATGTATCCGTAGAAATAGAGACTCGAGGAAGCACAAAATGCAGGTGAAACACAGCTCCGGATTGATTCCCTTGGTCTCCAAGGAGATCGCCGAGATCAAAGAGTCCGATCGGACTGCCGATTGCGAGAAAGGGGAACTCGTTAGGGTTGAGAATAAGAAAGAGATTGAGTTCCAGAGTGGAGTAGGTATGAAGAGTCAAGAGAGCGACGTGTCCGGCGGCGCCCGGAGTGACATGTCGGTGGAGGATCAGAACTTAGGGTGGGGTCGGTGGTACACCTTGAAGGAACTGGAAATGGCGACCGATGGATTTGTAGAAGAGAATGTGATTGGAGAAGGAGGCTACGGCATCGTGTACAGAGGAGTTTCGCCGGACGGCTCCGTCGTCGCCGTCAAGAATCTTCTTAATAATAAGGGTCAAGCAGAGAGAGAGTTCCAGGTTGAAGTAGAGGCCATTGGAAAAGTAAGGCACAAGAACTTGGTGGGTCTGATTGGTTATTGTGCAGAAGGAGCACAGAGGATGCTTGTGTATGAATTTGTTGATAATGGAAACTTAGAGCAATGGTTACATGGTGACGTGGGGCCTGTTAGCCCTCTAACATGGGATCTTAGGATGAAGATTGCTCTTGGAACAGCAAAAGGTTTGGCCTATTTGCATGAGGGTTTAGAACCTAAAGTTGTGCACCGTGATGTAAAATCCAGCAACATTCTTTTAGATAGAAAATGGAATGCAAAAGTATCTGATTTTGGACTTGCAAAGCTCTTACAACCCGAAGCCAGCTACGTAACTACTCGTGTAATGGGGACCTTTGGATATGTCTCCCCTGAGTATGCAAGTACTGGCATGCTTAACGAGGGAAGCGACGTATATAGTTTCGGGGTTCTACTTATGGAGATCATTACTGGTAGAAGCCCTATTGACTATTCCAGGCCCCCAGGAGAGATGAACTTGGTGGACTGGTTTAAAGGAATGGTGGCAAATCGCCGTGGCGAAGAGGTTGTAGATCCGTTGATCGAGATTCCGCCCCCTCCAAGAGCTTTAAAGCGAGTGTTGCTTGTTTGTCTACGCTGCATTGACTTGGATGCCAATAAAAGGCCAAAGATGGGGCAAATCGTTCATATGCTAGAGGCAGATGACTTTCCTTATCGCTCGGAGTTTCGATCTGTTCGAGAGAAAGATAACCAGCCTTCTTGTTTAGACGTGCCGAGCAAACTTCCATTGAAGAATGCTGGTAGTATAGATGACATGGAATCAAGAAAGAGATAA 1425 47.16 MAVSGANSTEIHPSDESSSSSSAVSQTSLSNFKIYAAIGVIAACLIAATALIFLCIRRNRDSRKHKMQVKHSSGLIPLVSKEIAEIKESDRTADCEKGELVRVENKKEIEFQSGVGMKSQESDVSGGARSDMSVEDQNLGWGRWYTLKELEMATDGFVEENVIGEGGYGIVYRGVSPDGSVVAVKNLLNNKGQAEREFQVEVEAIGKVRHKNLVGLIGYCAEGAQRMLVYEFVDNGNLEQWLHGDVGPVSPLTWDLRMKIALGTAKGLAYLHEGLEPKVVHRDVKSSNILLDRKWNAKVSDFGLAKLLQPEASYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGVLLMEIITGRSPIDYSRPPGEMNLVDWFKGMVANRRGEEVVDPLIEIPPPPRALKRVLLVCLRCIDLDANKRPKMGQIVHMLEADDFPYRSEFRSVREKDNQPSCLDVPSKLPLKNAGSIDDMESRKR 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5123136 5127267 + Hsped.02g05110.1 Hepe02g0511 562012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0511 474 MobiDBLite consensus disorder prediction 442 474 - -
Hepe02g0511 474 Pfam Protein tyrosine and serine/threonine kinase 160 428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0511 474 SMART serkin_6 157 428 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0511 474 ProSitePatterns Protein kinases ATP-binding region signature. 163 185 IPR017441 GO:0005524(InterPro)
Hepe02g0511 474 MobiDBLite consensus disorder prediction 1 23 - -
Hepe02g0511 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Hepe02g0511 474 PANTHER OS01G0323000 PROTEIN 21 447 IPR052232 -
Hepe02g0511 474 ProSiteProfiles Protein kinase domain profile. 157 436 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Hepe02g0511 474 SUPERFAMILY Protein kinase-like (PK-like) 141 434 IPR011009 -
Hepe02g0511 474 Gene3D Transferase(Phosphotransferase) domain 1 233 442 - -
Hepe02g0511 474 FunFam Putative receptor-like serine/threonine-protein kinase 233 443 - -
Hepe02g0511 474 Gene3D Phosphorylase Kinase; domain 1 122 232 - -
Hepe02g0511 474 CDD STKc_IRAK 163 429 - -
Hepe02g0511 474 FunFam Probable serine/threonine-protein kinase At1g01540 137 232 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0511 Hepe-Chr2:5123136 Hepe05g1969 Hepe-Chr5:70136357 2.42e-171 dispersed
Hepe04g1880 Hepe-Chr4:73732383 Hepe02g0511 Hepe-Chr2:5123136 1.65e-50 dispersed
Hepe02g0511 Hepe-Chr2:5123136 Hepe08g1295 Hepe-Chr8:14484578 3.43e-171 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
72530 PF07714 PK_Tyr_Ser-Thr 5.20E-46 CL0016 Hepe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0511 - - - 0.0