Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0549 ATGACTTCGTCTTCTTCCTCAGAAGCTCTAGAGATTCCCCTGCCACTGAAACCCATCCCCGGCAGCTATGGCCTCCCCTTCTTCGGACCCATCAAAGATCGCTACCAATACTTCTACACTCAAGGCCGAGAAGAATTCTTCCGAACTCGAATGCAAAAATATGCCTCCACTGTTTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCAATTCCAAAGTCATCGTCCTTCTCGACGCCCTCACCTTTCCGATCCTCTTCGACACCACTAAGGTCGAGAAAAAGAACGTTCTCGACGGAACTTACATGCCGTCCGTGGCCTTCACCGGCGGAATTCGCACCTGCGCCTTTCTCGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTGTTCCTCAAATTTCTCGCCTCTCGTCACCACCAATTCGTCCCTCTGTTTCGGAGCTCGGTGTCGAAGATGTTTAATAAGCTCGAAAGAGAATTGGATAAGAAGGAAATCGCCGATTTCAACCCCGCCAGCGATGCGGCGTCGTTTGATTTCATTTTCCGGTTGCTTTCTGATCGGAGCCCCGATGGGAAATTCTTCTCCGAGGGGCCGGGTTTAGTCGATCGATGGCTCGGGATGCAGCTCGCTCCGTTGGCCACCATCGGTCTGCCCAAATTCCTCAGCTGCATCGAAGATCTCGTTATCCATACTTTTCCTTTACCCTTCGCACTCGTTAGAAGTGCTTACAGGAAGCTTTACGATGCATTTTACGAGTCGTCGGGTTCGTTTCTAGACGAAGCAGAGAAACAGGGGATAAACAGAGAGAAAGCATGTCACAATTTAGTGTTCCTCGCCGGATTCAACGCATACGCCGGAATGAAAGTGTTGTTTCCAATTATACTAAACTGGGTCGGATCCGCCGGCGAGGGGCTCCACCGGAAGCTCGCCGAAGAAATCAGAGCCGCCGTGAAGGAAGACGGAGGACTGACATTCACCGCCTTAGAGAAAATGAGTCTGCTAAAATCCGTCGTGTACGAGGTTCTGAGAATCGACCCGCCGGTGCCGTACCAGTACGCGAAGGCGAAGAAGGACATCGTGATCGAGAGCCACGATTCTTCTTTCAAGATCAAGAAAGGCGAAATGATTTTTGGGTATCAGCCGATCGTGACTAAAGATCCGAAGATATTTGAGAATCCGGAGGAGTTCGTCGGCGAGAGGTTCATGGGAGAGAAAGGGGAGAAGCTGTTGAAGTATGTTTACTGGTCGAACGGCCGGGAGACGGAGGAGCCGACGGCGGAGAACAAGCAGTGTCCGGCGAGGGATCTGGTGGTGCTCGTGTCTAGAATAATTTTGGTGGAATTGTTTCTCCGGTACGACACGTTCGCCGTCGAGGGAGCTCGGTCGTCGTTGGGCTGGTCCGTTAAGGTCAAATCGTTGACCAAGGGGGAAGCTAAAGATAAAAGCTTAATCCTAGTCAACGACTGA 1476 51.9 MTSSSSSEALEIPLPLKPIPGSYGLPFFGPIKDRYQYFYTQGREEFFRTRMQKYASTVFRANMPPGPFISSNSKVIVLLDALTFPILFDTTKVEKKNVLDGTYMPSVAFTGGIRTCAFLDPSETEHSVLKRLFLKFLASRHHQFVPLFRSSVSKMFNKLERELDKKEIADFNPASDAASFDFIFRLLSDRSPDGKFFSEGPGLVDRWLGMQLAPLATIGLPKFLSCIEDLVIHTFPLPFALVRSAYRKLYDAFYESSGSFLDEAEKQGINREKACHNLVFLAGFNAYAGMKVLFPIILNWVGSAGEGLHRKLAEEIRAAVKEDGGLTFTALEKMSLLKSVVYEVLRIDPPVPYQYAKAKKDIVIESHDSSFKIKKGEMIFGYQPIVTKDPKIFENPEEFVGERFMGEKGEKLLKYVYWSNGRETEEPTAENKQCPARDLVVLVSRIILVELFLRYDTFAVEGARSSLGWSVKVKSLTKGEAKDKSLILVND 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5545568 5547314 - Hsped.02g05490.1 Hepe02g0549 562050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0549 491 FunFam Allene oxide synthase, chloroplastic 14 481 - -
Hepe02g0549 491 Gene3D Cytochrome P450 12 481 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0549 491 CDD CYP74 48 474 - -
Hepe02g0549 491 Pfam Cytochrome P450 310 417 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0549 491 PRINTS E-class P450 group IV signature 371 385 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0549 491 PRINTS E-class P450 group IV signature 334 350 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0549 491 PRINTS E-class P450 group IV signature 387 405 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0549 491 PANTHER CYTOCHROME P450 26 19 455 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Hepe02g0549 491 SUPERFAMILY Cytochrome P450 14 463 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0237 Hepe-Chr2:2406366 Hepe02g0549 Hepe-Chr2:5545568 6.59e-128 dispersed
Hepe02g0549 Hepe-Chr2:5545568 Hepe10g0683 Hepe-Chr10:9022204 2.09e-177 dispersed
Hepe02g0549 Hepe-Chr2:5545568 Hepe02g0550 Hepe-Chr2:5551713 7.54e-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0549 K01723 - csv:101211574 837.025