Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0550 ATGGCATCGTCTTCTTCCCCTGAACTTCCTCTGAAAACCATTCCCGGCGGCTATGGCTTTTCCGTCTTCGGTCCGATCAAAGACCGGTACGATTACTTTTACCTCCAAGGCAAAGACGAGTTCTTCCGATCCCGAATGACCAAATACAAATCCACCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCGACTCCCGTGTCGTCGTCCTTCTCGACGCCCTCAGCTTCCCGATCCTCTTCGACACCTCCAAGGTCGAAAAACGCAACATTCTCGACGGAACTTACATGCCCTCTTTGTCCTTCACCGGCGACCTTCGAACGTGCGCCTATTTGGACCCGTCGGAAACAGAGCACTCTGTTTTGAAAAACCTCTTCCTCTCTTTTCTCGCCTCTCGTCACGACCGGTTTATCCCTCTGTTTCGAAGCTCCTTGTCGGAGATGTTCATCAAGCTTGAAGATAAACTGGCGGAGAAGAAGAAGGTCGCTGATTTCAACGCGATTAGCGATTCGATGTCGTTTGATTACATTTTCCGGCTGCTCTCCGACGGAACACCTGATTCGAAATTGGCCACTGATGGACCTGGATTGCTCGATTTATGGCTCGGTTTCCAGCTCGCTCCACTGGCTTCACTTGGGTTGCCGAAAATATTTTCAGTTCTTGAAGATCTCGTCCTTCACACCATTCCCCTGCCTTTCTTTCTCGTTAAAAGTGGTTACAGGAAGATTTACAATGCGTTTTACTCCTCATCTGGTTCGTTTCTGGACGAAGCGGAGAAACAGGGGATTGACAGAGAGAAAGCGTGTCACAATTTACTGTTTCTCGCCGGATTCAACGCGTACGGCGGAATGAAAGTGTTATTTCCAACTTTGCTGAAGTGGGTCGGCTCCGCCGGCGAGGGGCTCCACCGGAAGCTCGCCGAAGAGGTTAGGACCGCTGTGAAGGAAGAAGGGGGGCTGAGTTTTGGTGCTTTAGAGAAAATGAGTCTGTTGAAATCCGTCGTGTATGAAGCTCTGAGGATCGAGCCGCCGGTGCCGTACCAGTACGGGAAGGCGAAGGAGGACATCGTGATTCAGAGTCACGACTCTGCTTTCAAGATCAAGAAAGGGGAGATGATCTTCGGGTATCAGCCGTTTGCTACTAAAGATCCGAAGGTGTTTGAGAATGCCGAGAAGTTCGTCGGCGATAGGTTCGTCGGAGAAGAAGGGAAGAAGCTTCTGAAGTATGTTTACTGGTCGAACGGCCGGGAGACAGAGGAGCCGGCGGCGGAGAACAAGCAGTGTCCGGGAAAGAATCTGGTGGTGGTGATGAGCAGGGTCATTCTGGTGGAATTCTTCCTCCGTTACGACACTTTTACCGTCGAGTTTGCCGACTTGCCGCTTGGTCCGTCGGTGAAGATCAAGTCGGTGACCAAAGCCACGGCGGCTAAATAG 1440 51.88 MASSSSPELPLKTIPGGYGFSVFGPIKDRYDYFYLQGKDEFFRSRMTKYKSTVFRANMPPGPFISSDSRVVVLLDALSFPILFDTSKVEKRNILDGTYMPSLSFTGDLRTCAYLDPSETEHSVLKNLFLSFLASRHDRFIPLFRSSLSEMFIKLEDKLAEKKKVADFNAISDSMSFDYIFRLLSDGTPDSKLATDGPGLLDLWLGFQLAPLASLGLPKIFSVLEDLVLHTIPLPFFLVKSGYRKIYNAFYSSSGSFLDEAEKQGIDREKACHNLLFLAGFNAYGGMKVLFPTLLKWVGSAGEGLHRKLAEEVRTAVKEEGGLSFGALEKMSLLKSVVYEALRIEPPVPYQYGKAKEDIVIQSHDSAFKIKKGEMIFGYQPFATKDPKVFENAEKFVGDRFVGEEGKKLLKYVYWSNGRETEEPAAENKQCPGKNLVVVMSRVILVEFFLRYDTFTVEFADLPLGPSVKIKSVTKATAAK 479
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5551713 5553232 - Hsped.02g05500.1 Hepe02g0550 562051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0550 479 Pfam Cytochrome P450 306 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 PANTHER CYTOCHROME P450 26 14 451 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
Hepe02g0550 479 CDD CYP74 43 470 - -
Hepe02g0550 479 FunFam Allene oxide synthase, chloroplastic 9 477 - -
Hepe02g0550 479 SUPERFAMILY Cytochrome P450 10 457 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 Gene3D Cytochrome P450 5 477 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 PRINTS E-class P450 group IV signature 383 401 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 PRINTS E-class P450 group IV signature 367 381 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 PRINTS E-class P450 group IV signature 330 346 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Hepe02g0550 479 PRINTS E-class P450 group IV signature 430 448 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0550 Hepe-Chr2:5551713 Hepe10g0683 Hepe-Chr10:9022204 2.36e-188 dispersed
Hepe02g0549 Hepe-Chr2:5545568 Hepe02g0550 Hepe-Chr2:5551713 7.54e-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0550 K01723 - csv:101211324 844.343