Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0579 | ATGCCGTTAGCCCGTGGTTTAACGAGTCCTCTAAGCCCATTGAGCCTAGGCCCAGGCCCAATCCACATCTTCATCTTCATCTTCTCTGTTCACTTTCGTTTGAATTCAAATCGAAGTCCAGAGTTCTCTGTATTGGCGCTCGAAATTCTCTGTCAAGGACCCATCACCAGAAAATTCGAAGAAAACAAGCTTCAGTTCAGCCAGGGATCTTTTGCTTCATTTCAACGGAAAATGGTGGAATCGAACTTGACTTACGAGGAATGCCGACGCCAGAGGTTGGAGGAGAATAAGAAGAGAATGGAAGAGCTTAATCTGAACAAACTTGTCGATGCTCTGAAATCTTCCAGCCCTAAATCCTCTCCGACGAAACAGCTAAAGCGTCCTCGCCAACCACTCGATACCTCGTCCCTCAGTGTGAGAAGGTCCAGCCGTTTTACTGATAAGCCCCCTCCTAACTATAAGGAGCTGCCCATTGAACCACTTCAAGGTCTCAGAAGGACTTATGAACGGAGAGATTTGTTGAATCGGGTTTATGCTTCACATGAAGAAAGACATTATGCTATTGACAGAGCACGAGACCTTCAATCTAGTCTGGAATCTAGGTACCCAAGTTTTGTGAAGCCAATGCTTCAGTCACATGTCACCGGGGGATTTTGGCTGGGTCTTCCAGTTCAATTTTGCAAGACACACCTTCCCCACGAGGATGAAATGCTTACTCTGGTGGACGAGGATGAAAATGAGTTCCAAACAAAATACCTTGCCGATAAAACAGGTCTCAGTGGTGGTTGGAGAGGGTTTTCCATTGATCACCAGTTAGTAGATGGGGATGCTTTGGTCTTCCATTTAACTAAGCCAACTGAATTCAAGGTATATATCATCAGGGCATACAATTTAGAAGACAAAAAAGATACCAATGAGGATTCCGATGTCCCCCAATTGGAAAAAAGTGGCAAAAGTACGAAGATCAGGGCTAATAAATCTGAAGATAAAGAAGATCACGGCAAGGATTCCGACGCCTCCCAATTGGAAAAAAGTGGCAAAAGAACTACTAGATCATCAGGGCAAAAAACCAGGGCAAATAATTCTGAAGATAAAGCAGATAACGGCAAGGATTCCGACGTCTCCCAATTGGAAAAAAGTGGCAAAAGAACTAGATCATCAGGGCAAAAGACCAGGGCAAATAATTCTGAAGATAAAGCAGATAACGTTGAGGAAACCAATGTCTCCCAGTTGGAAAAAAGTGGCAAAAGAACTACTAGATCATCAGCAAGTAAAGGGAAGAAGTAA | 1287 | 43.82 | MPLARGLTSPLSPLSLGPGPIHIFIFIFSVHFRLNSNRSPEFSVLALEILCQGPITRKFEENKLQFSQGSFASFQRKMVESNLTYEECRRQRLEENKKRMEELNLNKLVDALKSSSPKSSPTKQLKRPRQPLDTSSLSVRRSSRFTDKPPPNYKELPIEPLQGLRRTYERRDLLNRVYASHEERHYAIDRARDLQSSLESRYPSFVKPMLQSHVTGGFWLGLPVQFCKTHLPHEDEMLTLVDEDENEFQTKYLADKTGLSGGWRGFSIDHQLVDGDALVFHLTKPTEFKVYIIRAYNLEDKKDTNEDSDVPQLEKSGKSTKIRANKSEDKEDHGKDSDASQLEKSGKRTTRSSGQKTRANNSEDKADNGKDSDVSQLEKSGKRTRSSGQKTRANNSEDKADNVEETNVSQLEKSGKRTTRSSASKGKK | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 5887397 | 5890480 | + | Hsped.02g05790.1 | Hepe02g0579 | 562080 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 358 | 385 | - | - | |
Hepe02g0579 | 428 | ProSiteProfiles | B3 DNA-binding domain profile. | 205 | 296 | IPR003340 | GO:0003677(InterPro) | |
Hepe02g0579 | 428 | Coils | Coil | 83 | 103 | - | - | |
Hepe02g0579 | 428 | Gene3D | - | 180 | 298 | IPR015300 | - | |
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 302 | 428 | - | - | |
Hepe02g0579 | 428 | SUPERFAMILY | DNA-binding pseudobarrel domain | 198 | 295 | IPR015300 | - | |
Hepe02g0579 | 428 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED | 70 | 299 | IPR044837 | - | |
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 392 | 406 | - | - | |
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 302 | 345 | - | - | |
Hepe02g0579 | 428 | Pfam | B3 DNA binding domain | 205 | 294 | IPR003340 | GO:0003677(InterPro) | |
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 111 | 145 | - | - | |
Hepe02g0579 | 428 | SMART | B3_2 | 205 | 296 | IPR003340 | GO:0003677(InterPro) | |
Hepe02g0579 | 428 | MobiDBLite | consensus disorder prediction | 111 | 157 | - | - | |
Hepe02g0579 | 428 | CDD | B3_DNA | 203 | 294 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe10g0716 | Hepe-Chr10:9594584 | Hepe02g0579 | Hepe-Chr2:5887397 | 3.49e-64 | transposed | |
Hepe02g0579 | Hepe-Chr2:5887397 | Hepe07g0475 | Hepe-Chr7:4897169 | 8.79e-37 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54980 | PF02362 | B3 | 2.30E-15 | CL0405 | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0579 | - | - | - | 0.0 |