Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0602 ATGGATCCAAAACCTACTGATTCCCCAACACCACCCACTGTTAGTTCCTCGGAGACTAAACCTCCAGGAGTACAGCCTCAGGCTCCTGCTGCCTCTGGAATGGATAATGTGGCACGAGATGCACCATCTAAGTTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAGATTTCTCAACCACAGTCAGCTTCACAAGATGGCACGACTGAAAATGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGTTTAGGATTGAACTTATCTCCAAAATCTCCTGCACCTAATGATTCCCCAGATGGAACTTCTAAAATTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGGTTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCTATGGGTTTCCCTGCCGGTGACATGAGCTCAGGGTTTTTCGGATATGTTGAGGGTTTCTACAGGAACCACATGGAAGAAGTCATTAAATTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCTGAGAGGCTATATGATGCGTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCGGTTCAACTGATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGTCTTCTTCTATATTTAAAGTTCTTTCCAACTGCTGAAGAATCCATTGAATACTACAATCTAAGAAGGTGTTTTGATGGCAAAGGCCTGGTTTTACCAAGTCAAATTAGGTATGTCAAGTATTTTGAACGTATTTTAACATACTTCAATGGAGAAAATCCTCCTGGCCGCAGGTGCGTGCTTAGAGGGTTTCGCCTCCACAGATGTCCATATTGGATCAGGCCTTCCATTACTGTATCTAACCATAATGGTGTTTTGTTCTCCACTAAAACGCATTCAAGAACCAAGAATCTCTCGGCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCTTTGCCCGGGGAGCCTGGTCTAGCTGAGTTGTGTGGAGACTTCAAGGTTCATTTCCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACTGAAAATCGGAAAATGCTCTACACTAATGATCTTGATGGGTTCGACAAGAGGAAACTGCCTTCCCCTGGATTTCAGGTGGAGGTTGTTCTAGTAGATACGTCGCCCAACGGGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCGAAACCTTCTGCAGTTGATGCAGTTGATGGGAGTGAAGTTTCTGAGAACCAAAACAGAAAGTCAGGAACTAGTGATAAATATGATATATTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGCAAGAAGGAGGCAGCTGAAGGTTTAGAGGCCGAAGAATCAGCTGTCAAGACGACATCTAAATCTCTAACGAGTGCGACTTCAGCAGACAATGTTGCAAGTTTATCACACGCAACAAAGCAAGTTTCCCTTGGAGATGGTGGAGCTAAGCAGACTGCTCCTGCTAGCGACAGAAAAGGTGATGGAGTCAAAAGATCTGATTCTCTCCCAGAACTTCCAAACTCAGAAAGTGAATTCAAGGCCATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAGTGAGTAA 1851 42.9 MDPKPTDSPTPPTVSSSETKPPGVQPQAPAASGMDNVARDAPSKLSPSGITSWAKNLKISQPQSASQDGTTENAGKSAFARFTSGLGLNLSPKSPAPNDSPDGTSKIAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPVQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLYLKFFPTAEESIEYYNLRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPGRRCVLRGFRLHRCPYWIRPSITVSNHNGVLFSTKTHSRTKNLSAEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNGDNTTKKSDESSGSKPSAVDAVDGSEVSENQNRKSGTSDKYDILFSDSESEGGSSKSKKEAAEGLEAEESAVKTTSKSLTSATSADNVASLSHATKQVSLGDGGAKQTAPASDRKGDGVKRSDSLPELPNSESEFKAMAADASVFTFGDDEDYESE 616
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6253950 6259192 + Hsped.02g06020.1 Hepe02g0602 562103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0602 616 MobiDBLite consensus disorder prediction 86 109 - -
Hepe02g0602 616 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 399 454 IPR035892 -
Hepe02g0602 616 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 258 297 IPR000387 GO:0016311(InterPro)
Hepe02g0602 616 MobiDBLite consensus disorder prediction 87 109 - -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 531 557 - -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 456 475 - -
Hepe02g0602 616 ProSiteProfiles Phosphatase tensin-type domain profile. 144 323 IPR029023 -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 1 74 - -
Hepe02g0602 616 Pfam Polymorphic toxin system, DSP-PTPase phosphatase 225 278 - -
Hepe02g0602 616 Pfam PTEN2, C2 domain 330 457 - -
Hepe02g0602 616 SMART PTEN_C2_2 328 456 IPR014020 -
Hepe02g0602 616 ProSitePatterns Tyrosine specific protein phosphatases active site. 260 270 IPR016130 GO:0016311(InterPro)
Hepe02g0602 616 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 157 324 IPR029021 -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 512 527 - -
Hepe02g0602 616 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 131 557 IPR051281 GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)
Hepe02g0602 616 ProSiteProfiles C2 tensin-type domain profile. 330 457 IPR014020 -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 484 511 - -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 455 596 - -
Hepe02g0602 616 CDD PTP_PTEN 154 319 IPR045101 GO:0016791(InterPro)
Hepe02g0602 616 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 129 326 - -
Hepe02g0602 616 Gene3D Protein tyrosine phosphatase superfamily 129 326 IPR029021 -
Hepe02g0602 616 Gene3D - 333 458 - -
Hepe02g0602 616 MobiDBLite consensus disorder prediction 45 74 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g2078 Hepe-Chr2:51911721 Hepe02g0602 Hepe-Chr2:6253950 1.14e-45 transposed
Hepe02g0602 Hepe-Chr2:6253950 Hepe04g1268 Hepe-Chr4:68209864 6.85e-240 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0602 K01110 - csv:101222304 1086.63