Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0613 ATGGGCAGCGTTGAAGGAGAAAGAACAGCAACAGGATTTGCAGCAACAGACCCATCTGGGTTCCTCTCTCCATACACTTACCAACTCAGAGAAACAGGGGAAGATGATGTTTACATAAGAGTAATATGCTGTGGACTCTGCCATACTGATATTCATAACATCAAAAACGACCTCGGAATGTCCAATTACCCCATGGTTCCAGGGCATGAAGTGGTTGGTGAGGTGATGGAAGTTGGGAAGAATGTAAAGAAATTCAGTGTAAAGGATGTTGTGGGAGTTGGATGTATAGTTGGATCTTGTAAAAGTTGCGAGAGATGTGGGAGTGATAGAGAGCAATATTGCAATAACAGAATTTGGACTAATAATGATGTTTTCACCGACGGCAACCCGACCCAAGGCGGCTTCGCCACCGCCATGGTCGTCGACCAAAAATTTGTGGTGAAAGTCCCTGATGGGATGGCGCCGGAACAGGCGTCGGCGCTGCTATGCGCCGGGGTGACGGTGTACAGCCCACTGAACCACTTCGGGCTGAAGGAAAGTGGGCTGAGGGGAGGAATCTTGGGGCTCGGCGGGGTCGGCCATATGGGGGTGAAACTGGCTAAGGCATTGGGCCACCATGTGACCGTCATTAGTTCATCCAACAAGAAGAGAGAAGAAGCTCTAGACCATCTCGGTGCCGATGACTACCTTGTCAGCTCCGACGAGGCTGGGATGCAACGGGCCGTCGACTCCCTCGATTACATTATCGACACGGTGCCGGTGTTTCACCCTCTCGAGCCTTATCTTTCGCTTTTGAAGCTGGATGGCAAGTTGATCATGTTGGGCGTTGTTAATAAACCTCTTCAGTTCATCTCTCCCATGGTCATTCTCGGGAGGAAGACGATCACGGGGAGCTTCATAGGGAGCATGAAGGAGACACAAGAGATTTTAGAATTCTTCAAAGAGAAGGAATTGAGTTCAATGGTGGAAGTGGTGAAGATGGACTACATAAACAAAGCCATTGAAAGGTTGGAGAAGAATGATGTTAGATACAGGTTCGTGGTGGATGTTGAGGGAAGCAAGTTTTAA 1068 48.78 MGSVEGERTATGFAATDPSGFLSPYTYQLRETGEDDVYIRVICCGLCHTDIHNIKNDLGMSNYPMVPGHEVVGEVMEVGKNVKKFSVKDVVGVGCIVGSCKSCERCGSDREQYCNNRIWTNNDVFTDGNPTQGGFATAMVVDQKFVVKVPDGMAPEQASALLCAGVTVYSPLNHFGLKESGLRGGILGLGGVGHMGVKLAKALGHHVTVISSSNKKREEALDHLGADDYLVSSDEAGMQRAVDSLDYIIDTVPVFHPLEPYLSLLKLDGKLIMLGVVNKPLQFISPMVILGRKTITGSFIGSMKETQEILEFFKEKELSSMVEVVKMDYINKAIERLEKNDVRYRFVVDVEGSKF 355
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6372574 6374372 - Hsped.02g06130.1 Hepe02g0613 562114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0613 355 PANTHER ALDEHYDE REDUCTASE 9 351 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Hepe02g0613 355 FunFam Putative cinnamyl alcohol dehydrogenase 6 321 350 - -
Hepe02g0613 355 Pfam Alcohol dehydrogenase GroES-like domain 33 151 IPR013154 -
Hepe02g0613 355 Gene3D - 164 320 - -
Hepe02g0613 355 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 318 IPR036291 -
Hepe02g0613 355 SMART PKS_ER_names_mod 20 348 IPR020843 GO:0016491(InterPro)
Hepe02g0613 355 Pfam Zinc-binding dehydrogenase 191 314 IPR013149 -
Hepe02g0613 355 SUPERFAMILY GroES-like 16 181 IPR011032 -
Hepe02g0613 355 CDD CAD1 11 349 IPR047109 GO:0016616(InterPro)
Hepe02g0613 355 Gene3D - 13 350 - -
Hepe02g0613 355 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Hepe02g0613 355 FunFam Cinnamyl alcohol dehydrogenase 164 320 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0613 Hepe-Chr2:6372574 HepeContig67g0004 Hepe-ChrContig67:510515 6.23e-128 dispersed
Hepe02g0613 Hepe-Chr2:6372574 Hepe07g0442 Hepe-Chr7:4564478 7.35e-196 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0613 K00083 - csv:101214622 603.979