Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Hepe02g0630 | ATGGACTCGCCGGTGTACTTCAATCCCTCCCTCCGAACGTCGAAGAAGCGCGACGCAGAGGACCACTTTCTCCAACTTTCCACCTCCAACAAGAGAGTCGTGCTTGGCGAGATCACCAACTCGTTGATTTTCAGTCCCAGCCAGTGCTCGCTTTCTGACCAGGAGATGACGGACAAGGATCTGGACGAGGAGGATCTTCCTGAAACAACGTCTGTTGATTGTTCGAAGAAGCCTGCTTCTGCATCTACCATGTATAACCACCTTCGATCTCTGGAGATGGAATTACACATACCAAATAACATTGAAAAGGCTCACAATGGTGAATCCAGTTTAACTTTCGCTCATGTACGAGAAATTCTTGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTCGAATGCTGTTGACAGAAACAAGCTGCAGCTGCTTGGTGTTTGTTGTATGCTTATTGCATCGAAGTATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACATATACCAAAGAACAGGTACTGAGTATGGAGAGAGAGGTACGCAAATTCTTGACCTGTGAAGGTGCCCCCACGATAAAAAATTTTCTTAGAATATTTACAAAAGTTGCTTTGGAAAATTGGAAGGCTCCCGACTTGCAATTTGAGTTCTTGAGTTCTTATCTTGCGGATATAAGTTTGTCAGAGCTCCGTTGTGTACAATTCTTACCATCAATAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTGCAACGTTACTCCGGTTACAGGCCATCTGAATTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCACTTTACAAGCAATAAGAGACAAGTACAAACAACATAAGTTCAATAGTGTGGCAGAGTTATCTTCTCCCTCAGAGATTCCTGCATATTATTTTGAGGACATTGATAAGCAATCATTCAACAGGCTCTTAAGCACTTAA | 1080 | 42.13 | MDSPVYFNPSLRTSKKRDAEDHFLQLSTSNKRVVLGEITNSLIFSPSQCSLSDQEMTDKDLDEEDLPETTSVDCSKKPASASTMYNHLRSLEMELHIPNNIEKAHNGESSLTFAHVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSSNAVDRNKLQLLGVCCMLIASKYEEISPPHVEDFCYITDNTYTKEQVLSMEREVRKFLTCEGAPTIKNFLRIFTKVALENWKAPDLQFEFLSSYLADISLSELRCVQFLPSIVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSTLQAIRDKYKQHKFNSVAELSSPSEIPAYYFEDIDKQSFNRLLST | 359 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 6598898 | 6602440 | - | Hsped.02g06300.1 | Hepe02g0630 | 562131 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Hepe02g0630 | 359 | PANTHER | CYCLINS | 60 | 325 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
| Hepe02g0630 | 359 | CDD | CYCLIN_AtCycA-like_rpt2 | 214 | 328 | - | - | |
| Hepe02g0630 | 359 | ProSiteProfiles | Linker histone H1/H5 globular (H15) domain profile. | 285 | 359 | IPR005818 | GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro) | |
| Hepe02g0630 | 359 | MobiDBLite | consensus disorder prediction | 54 | 73 | - | - | |
| Hepe02g0630 | 359 | Gene3D | - | 97 | 212 | - | - | |
| Hepe02g0630 | 359 | SMART | cyclin_7 | 122 | 206 | IPR013763 | - | |
| Hepe02g0630 | 359 | SMART | cyclin_7 | 218 | 306 | IPR013763 | - | |
| Hepe02g0630 | 359 | SMART | Cyclin_C_2 | 214 | 337 | IPR004367 | - | |
| Hepe02g0630 | 359 | SUPERFAMILY | Cyclin-like | 81 | 209 | IPR036915 | - | |
| Hepe02g0630 | 359 | SUPERFAMILY | Cyclin-like | 214 | 338 | IPR036915 | - | |
| Hepe02g0630 | 359 | FunFam | Cyclin A1 | 199 | 333 | - | - | |
| Hepe02g0630 | 359 | Gene3D | - | 84 | 333 | - | - | |
| Hepe02g0630 | 359 | Pfam | Cyclin, C-terminal domain | 214 | 336 | IPR004367 | - | |
| Hepe02g0630 | 359 | Pfam | Cyclin, N-terminal domain | 84 | 208 | IPR006671 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Hepe02g0630 | Hepe-Chr2:6598898 | Hepe08g1310 | Hepe-Chr8:14851347 | 5.29e-95 | dispersed | |
| Hepe01g1808 | Hepe-Chr1:83084556 | Hepe02g0630 | Hepe-Chr2:6598898 | 2.85e-102 | wgd | |
| Hepe02g0630 | Hepe-Chr2:6598898 | Hepe08g1309 | Hepe-Chr8:14807717 | 2.07e-97 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Hepe02g0630 | K06627 | - | csv:101213896 | 560.836 |