Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0630 ATGGACTCGCCGGTGTACTTCAATCCCTCCCTCCGAACGTCGAAGAAGCGCGACGCAGAGGACCACTTTCTCCAACTTTCCACCTCCAACAAGAGAGTCGTGCTTGGCGAGATCACCAACTCGTTGATTTTCAGTCCCAGCCAGTGCTCGCTTTCTGACCAGGAGATGACGGACAAGGATCTGGACGAGGAGGATCTTCCTGAAACAACGTCTGTTGATTGTTCGAAGAAGCCTGCTTCTGCATCTACCATGTATAACCACCTTCGATCTCTGGAGATGGAATTACACATACCAAATAACATTGAAAAGGCTCACAATGGTGAATCCAGTTTAACTTTCGCTCATGTACGAGAAATTCTTGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTATCGGACACCCTATATCTCACCATATCACATATTGACAGATACTTATCCTCGAATGCTGTTGACAGAAACAAGCTGCAGCTGCTTGGTGTTTGTTGTATGCTTATTGCATCGAAGTATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACATATACCAAAGAACAGGTACTGAGTATGGAGAGAGAGGTACGCAAATTCTTGACCTGTGAAGGTGCCCCCACGATAAAAAATTTTCTTAGAATATTTACAAAAGTTGCTTTGGAAAATTGGAAGGCTCCCGACTTGCAATTTGAGTTCTTGAGTTCTTATCTTGCGGATATAAGTTTGTCAGAGCTCCGTTGTGTACAATTCTTACCATCAATAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTGCAACGTTACTCCGGTTACAGGCCATCTGAATTGAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCACTTTACAAGCAATAAGAGACAAGTACAAACAACATAAGTTCAATAGTGTGGCAGAGTTATCTTCTCCCTCAGAGATTCCTGCATATTATTTTGAGGACATTGATAAGCAATCATTCAACAGGCTCTTAAGCACTTAA 1080 42.13 MDSPVYFNPSLRTSKKRDAEDHFLQLSTSNKRVVLGEITNSLIFSPSQCSLSDQEMTDKDLDEEDLPETTSVDCSKKPASASTMYNHLRSLEMELHIPNNIEKAHNGESSLTFAHVREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSSNAVDRNKLQLLGVCCMLIASKYEEISPPHVEDFCYITDNTYTKEQVLSMEREVRKFLTCEGAPTIKNFLRIFTKVALENWKAPDLQFEFLSSYLADISLSELRCVQFLPSIVAASAIFLSRFTIQPEKHPWCLALQRYSGYRPSELKECILAIHDLQLNRKGSTLQAIRDKYKQHKFNSVAELSSPSEIPAYYFEDIDKQSFNRLLST 359
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 6598898 6602440 - Hsped.02g06300.1 Hepe02g0630 562131
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0630 359 PANTHER CYCLINS 60 325 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Hepe02g0630 359 CDD CYCLIN_AtCycA-like_rpt2 214 328 - -
Hepe02g0630 359 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 285 359 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Hepe02g0630 359 MobiDBLite consensus disorder prediction 54 73 - -
Hepe02g0630 359 Gene3D - 97 212 - -
Hepe02g0630 359 SMART cyclin_7 122 206 IPR013763 -
Hepe02g0630 359 SMART cyclin_7 218 306 IPR013763 -
Hepe02g0630 359 SMART Cyclin_C_2 214 337 IPR004367 -
Hepe02g0630 359 SUPERFAMILY Cyclin-like 81 209 IPR036915 -
Hepe02g0630 359 SUPERFAMILY Cyclin-like 214 338 IPR036915 -
Hepe02g0630 359 FunFam Cyclin A1 199 333 - -
Hepe02g0630 359 Gene3D - 84 333 - -
Hepe02g0630 359 Pfam Cyclin, C-terminal domain 214 336 IPR004367 -
Hepe02g0630 359 Pfam Cyclin, N-terminal domain 84 208 IPR006671 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0630 Hepe-Chr2:6598898 Hepe08g1310 Hepe-Chr8:14851347 5.29e-95 dispersed
Hepe01g1808 Hepe-Chr1:83084556 Hepe02g0630 Hepe-Chr2:6598898 2.85e-102 wgd
Hepe02g0630 Hepe-Chr2:6598898 Hepe08g1309 Hepe-Chr8:14807717 2.07e-97 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0630 K06627 - csv:101213896 560.836