Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0640 ATGATGCTGAGGTCGTTTTACCGGCCGCTCGAGCGGTGTTTTGGGCGGTGGGCCGGCGATGGGCTGCTCTGGCACTCGGAATTGAAGCCTCATGCCTCCGGTGATTACTCGATCGCCGTTGTTCAAGCCAATTCGTGTCTTGAGGATCAGAGTCAGGTTTTTACGTCCCCTTCTGCAACTTATGTTGGTGTTTATGATGGCCATGGCGGCCCTGAGGCTTCTCGCTTCGTCAATAAGCATCTTTTTCCTTATATGCACAAGTTTGCTTCAGAACAAGGTGGGCTCTCGGAGGATGTTATTAAAAAGGCATTCAATGCTACTGAAGAGGAGTTTCTGCGTTTGGTGAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTGGGTGCAATTTCGAATAGAAAGTTATACGTTGCGAATCTCGGGGATTCGAGAGCTGTGCTCGGCCGTAGAGATTTGGAGAGTAGCAAGAGAACACCGGTCGTTGCAGAACGGTTGTCCACCGATCATAATGTCGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGACAACCATATAGTTGTTTATACCCGTGGAGTTTGGAGGATAAAGGGCATAATTCAGGTTTCAAGATCTATTGGTGATGTCTATTTAAAGAAACCCGAAGTCAACCGGGAACCAATATTCCAACAATTTGGGAACCCCGTTCCGTTGAAGCGGCCAGTAATGACTGCAGAACCGTCGATTCTTATACGAGAGCTTAAACCCCAAGACTTATTCCTGATCTTTGCATCAGATGGCCTCTGGGAACAACTGACTGATGAGGCTGCCGTGGAGATAGTTTTCAAGAACCCAAGAGCTGTAAGTTGCAGACTACTCCCCCATTTATGTCATTTACAAAACATTAACTCCAAACAGATTTTAACATTTCTTCGACTGCTTCAGGGAATTGCCAAGAGATTAGTGAGTGCTGCCCTCAACGAGGCAGCGAGGAAGCGAGAGATGAGATATGCCGACATAAAGAAGATCGAAAAAGGGATTCGACGACATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAACAGAAGCTCACCTAGCAGCAGCCGAGCAAAGAACAGCATTGCCGGGTACACCAGTGCACCTGTTGACATTTTCTCTCTCAACTCAAACTATGAGGCAGAGGATAAACTTCACACTATGTTCTGA 1230 47.15 MMLRSFYRPLERCFGRWAGDGLLWHSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFLRLVKRALPAKPQIASVGSCCLVGAISNRKLYVANLGDSRAVLGRRDLESSKRTPVVAERLSTDHNVGVDEVRKEVVALHPDDNHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEVNREPIFQQFGNPVPLKRPVMTAEPSILIRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAVSCRLLPHLCHLQNINSKQILTFLRLLQGIAKRLVSAALNEAARKREMRYADIKKIEKGIRRHFHDDITVIVVYLDHNRSSPSSSRAKNSIAGYTSAPVDIFSLNSNYEAEDKLHTMF 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6678003 6680819 - Hsped.02g06400.1 Hepe02g0640 562141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0640 409 ProSiteProfiles PPM-type phosphatase domain profile. 35 366 IPR001932 -
Hepe02g0640 409 CDD PP2Cc 42 366 IPR001932 -
Hepe02g0640 409 PANTHER PROTEIN PHOSPHATASE 30 365 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Hepe02g0640 409 Gene3D - 25 375 IPR036457 -
Hepe02g0640 409 SMART PP2C_4 25 364 IPR001932 -
Hepe02g0640 409 FunFam Probable protein phosphatase 2C 42 26 318 - -
Hepe02g0640 409 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Hepe02g0640 409 SUPERFAMILY PP2C-like 43 367 IPR036457 -
Hepe02g0640 409 Pfam Protein phosphatase 2C 56 288 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0640 Hepe-Chr2:6678003 Hepe05g0524 Hepe-Chr5:7220977 1.13e-132 dispersed
Hepe02g0640 Hepe-Chr2:6678003 Hepe08g0307 Hepe-Chr8:2764993 2.14e-129 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0640 - - - 0.0