Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0650 ATGGAGCAACTCAGAGGCCCCATTGAAGATAATAATGGATCAGATCATCACCAATGGAGCTCTCTCAATGGAACAACCTTCACAGCTGATGAAGAAGAAGCAAATTTCATGGCTCAACTCTTCAACAACACCACCACAACTACTCCTCAATATCCTTTCATGGCTGCCTTTGATAATAATAATAATCTTCATGAAGATCAAACACCTTCTTCTTCAAGCTTTTACAGGCTTTCCCAAGAGAGCAGTGAGTTTAGTGGTGGAAATTATTGCAGCCAATTATTATTATTCCCCACTCTAAATGATCATTTTTATTGCAATAATAATCCCATCAATTTTTCCTTGGGAGAACTTGGAAATAATAACAATGGTGGTTTTAACATTGTTGAAGATGAGGAGTACTCTATGAATCTAGAGATGAGTGAGGCTAATTTGCAGCCTTGTTCTAAAGCTGATTTGATCAAATTACCTGAAGAAGCTGCCATGGAAGAAGAGGGCCATAACAAGCTTGAGATCAATGGCAAGAAAAGATCAAGGGGTTTTGGTGATGTACAAAAGAGAAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAGCAGCAACACTGAAGAAGATGGCAATGCTGGCTATAGCAGGCAAAGCACAAGCAACTATTGCTCGGAAGACGAATACAATGCCTCTCTCGAGCTAAACGGAGGAGCTAATAACTCAAGATCGAGTCCGAAAGGGCCGACCAAATCCCGAGCCAGCAGAGGCTCAGCTACAGATCCACAGAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAGAGGTTGAAAATCTTACAAAATCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTTGAGGAAGCTGTTGAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTACGCTCCGATCGCTTACAACGGAATGGATATCGGTCTTAATCGGACCCCGAACACACCAAAAGAATTATGA 1023 40.76 MEQLRGPIEDNNGSDHHQWSSLNGTTFTADEEEANFMAQLFNNTTTTTPQYPFMAAFDNNNNLHEDQTPSSSSFYRLSQESSEFSGGNYCSQLLLFPTLNDHFYCNNNPINFSLGELGNNNNGGFNIVEDEEYSMNLEMSEANLQPCSKADLIKLPEEAAMEEEGHNKLEINGKKRSRGFGDVQKRRNERSKKTQKLTSSSNTEEDGNAGYSRQSTSNYCSEDEYNASLELNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNRTPNTPKEL 340
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6822390 6824342 + Hsped.02g06500.1 Hepe02g0650 562151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0650 340 MobiDBLite consensus disorder prediction 162 267 - -
Hepe02g0650 340 FunFam Basic helix-loop-helix transcription factor 255 312 - -
Hepe02g0650 340 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 46 323 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Hepe02g0650 340 Gene3D - 256 312 IPR036638 GO:0046983(InterPro)
Hepe02g0650 340 SMART finulus 260 309 IPR011598 GO:0046983(InterPro)
Hepe02g0650 340 MobiDBLite consensus disorder prediction 1 22 - -
Hepe02g0650 340 Pfam Helix-loop-helix DNA-binding domain 264 304 IPR011598 GO:0046983(InterPro)
Hepe02g0650 340 MobiDBLite consensus disorder prediction 195 258 - -
Hepe02g0650 340 MobiDBLite consensus disorder prediction 162 189 - -
Hepe02g0650 340 CDD bHLH_AtIND_like 255 317 - -
Hepe02g0650 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 254 303 IPR011598 GO:0046983(InterPro)
Hepe02g0650 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 254 319 IPR036638 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0650 Hepe-Chr2:6822390 Hepe09g0590 Hepe-Chr9:5547958 5.43e-17 dispersed
Hepe02g2384 Hepe-Chr2:69148357 Hepe02g0650 Hepe-Chr2:6822390 9.01e-21 transposed
Hepe01g1823 Hepe-Chr1:83179898 Hepe02g0650 Hepe-Chr2:6822390 1.36e-40 wgd
Hepe02g0650 Hepe-Chr2:6822390 Hepe07g0418 Hepe-Chr7:4351725 1.52e-53 wgd
Hepe02g0650 Hepe-Chr2:6822390 Hepe08g1329 Hepe-Chr8:15158851 3.66e-42 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
54986 PF00010 HLH 1.50E-09 No_clan Hepe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0650 - - - 0.0