Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Hepe02g0650 | ATGGAGCAACTCAGAGGCCCCATTGAAGATAATAATGGATCAGATCATCACCAATGGAGCTCTCTCAATGGAACAACCTTCACAGCTGATGAAGAAGAAGCAAATTTCATGGCTCAACTCTTCAACAACACCACCACAACTACTCCTCAATATCCTTTCATGGCTGCCTTTGATAATAATAATAATCTTCATGAAGATCAAACACCTTCTTCTTCAAGCTTTTACAGGCTTTCCCAAGAGAGCAGTGAGTTTAGTGGTGGAAATTATTGCAGCCAATTATTATTATTCCCCACTCTAAATGATCATTTTTATTGCAATAATAATCCCATCAATTTTTCCTTGGGAGAACTTGGAAATAATAACAATGGTGGTTTTAACATTGTTGAAGATGAGGAGTACTCTATGAATCTAGAGATGAGTGAGGCTAATTTGCAGCCTTGTTCTAAAGCTGATTTGATCAAATTACCTGAAGAAGCTGCCATGGAAGAAGAGGGCCATAACAAGCTTGAGATCAATGGCAAGAAAAGATCAAGGGGTTTTGGTGATGTACAAAAGAGAAGGAATGAGAGGTCAAAGAAAACTCAGAAGCTTACCTCAAGCAGCAACACTGAAGAAGATGGCAATGCTGGCTATAGCAGGCAAAGCACAAGCAACTATTGCTCGGAAGACGAATACAATGCCTCTCTCGAGCTAAACGGAGGAGCTAATAACTCAAGATCGAGTCCGAAAGGGCCGACCAAATCCCGAGCCAGCAGAGGCTCAGCTACAGATCCACAGAGCCTCTATGCAAGGAAAAGAAGAGAAAGAATCAATGAGAGGTTGAAAATCTTACAAAATCTTGTCCCAAATGGAACAAAGGTTGATATCAGCACAATGCTTGAGGAAGCTGTTGAATATGTGAAGTTTCTACAACTCCAAATCAAGCTATTAAGCTCTGATGATTTATGGATGTACGCTCCGATCGCTTACAACGGAATGGATATCGGTCTTAATCGGACCCCGAACACACCAAAAGAATTATGA | 1023 | 40.76 | MEQLRGPIEDNNGSDHHQWSSLNGTTFTADEEEANFMAQLFNNTTTTTPQYPFMAAFDNNNNLHEDQTPSSSSFYRLSQESSEFSGGNYCSQLLLFPTLNDHFYCNNNPINFSLGELGNNNNGGFNIVEDEEYSMNLEMSEANLQPCSKADLIKLPEEAAMEEEGHNKLEINGKKRSRGFGDVQKRRNERSKKTQKLTSSSNTEEDGNAGYSRQSTSNYCSEDEYNASLELNGGANNSRSSPKGPTKSRASRGSATDPQSLYARKRRERINERLKILQNLVPNGTKVDISTMLEEAVEYVKFLQLQIKLLSSDDLWMYAPIAYNGMDIGLNRTPNTPKEL | 340 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6822390 | 6824342 | + | Hsped.02g06500.1 | Hepe02g0650 | 562151 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Hepe02g0650 | 340 | MobiDBLite | consensus disorder prediction | 162 | 267 | - | - | |
Hepe02g0650 | 340 | FunFam | Basic helix-loop-helix transcription factor | 255 | 312 | - | - | |
Hepe02g0650 | 340 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 46 | 323 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Hepe02g0650 | 340 | Gene3D | - | 256 | 312 | IPR036638 | GO:0046983(InterPro) | |
Hepe02g0650 | 340 | SMART | finulus | 260 | 309 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g0650 | 340 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Hepe02g0650 | 340 | Pfam | Helix-loop-helix DNA-binding domain | 264 | 304 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g0650 | 340 | MobiDBLite | consensus disorder prediction | 195 | 258 | - | - | |
Hepe02g0650 | 340 | MobiDBLite | consensus disorder prediction | 162 | 189 | - | - | |
Hepe02g0650 | 340 | CDD | bHLH_AtIND_like | 255 | 317 | - | - | |
Hepe02g0650 | 340 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 254 | 303 | IPR011598 | GO:0046983(InterPro) | |
Hepe02g0650 | 340 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 254 | 319 | IPR036638 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Hepe02g0650 | Hepe-Chr2:6822390 | Hepe09g0590 | Hepe-Chr9:5547958 | 5.43e-17 | dispersed | |
Hepe02g2384 | Hepe-Chr2:69148357 | Hepe02g0650 | Hepe-Chr2:6822390 | 9.01e-21 | transposed | |
Hepe01g1823 | Hepe-Chr1:83179898 | Hepe02g0650 | Hepe-Chr2:6822390 | 1.36e-40 | wgd | |
Hepe02g0650 | Hepe-Chr2:6822390 | Hepe07g0418 | Hepe-Chr7:4351725 | 1.52e-53 | wgd | |
Hepe02g0650 | Hepe-Chr2:6822390 | Hepe08g1329 | Hepe-Chr8:15158851 | 3.66e-42 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
54986 | PF00010 | HLH | 1.50E-09 | No_clan | Hepe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Hepe02g0650 | - | - | - | 0.0 |