Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Hepe02g0686 ATGTTGGAGCCGGTTAGTTGCTGCCAGAGCTCCCAGTCTCAGATTTATAGTGTAGTTAAACAGAAGAATCCTTTCAGGGCCTACTCTCATACTGTTCGTCAACTTTGTGGACCTTCCTTCAACTTACATTATTCACACTCGAAAAAAGTGGCTGTTCCATCATGCACCATAAATTGCTGGAGGAATAATTGTTCTTTAGTCCCAGTACTTTTCCACAACAGTGCTACTAAGCTAACGTTCAAAGTAGATGGGCCGAATGGATACAATTGGTCTAATCATAGGCCTAAACCAAGGGAAAGATTAAGAATGCGTGCAACTCTTGAGGTTGCAGCTGCTGTTGACGTCATCAATGATTTGGGATTGGATACATTGACATTCCTAGCCGTGACTGTCGTAGTTGTTCCTCTATTTAGGAGAATTAAAGCTAGCCCGATACTTGGTTTCTTCTTTGCTGGGATTGTACTCAATCAATTTGGCGTGATTAGAAATATTGTAGACGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGTTTGGAGCTTTCATTTGCACGTCTAAAGGCTCTTGCAAAGTTTGCTTTTGGCATGGGTTTGACACAGGTTATATTATCTACTATCGCTTTCACAGCATTTGAACTTCCCCCTAATGGGGCTATTGGAACAAGAATTTTGGAGTTCCTTTTTCACGCCAGATCTGACTTGGTTAACATCAGAAGCGTTGATGAAGCTATTGTGATTGGTGCTGCCCTTTCTCTATCTTCTTCAGCTTTTGTTTTACAGCTTCTTGCAGAGAAAGGAGAGCTTGCGACAAGATTGGGCTCAGCAACTTTAGGGATACTTCTTCTTCAGGATATTGCTGTTGTCCCTCTCCTGGTCGTACTTCCAGTTCTTGAGAGCCAGAACTTAGGCACGGAAAGTATCTGGCCAATGCTTGCACAAGAAAGTTTGAAGGCTTTAGGTGGACTGGGTCTGCTGTCCCTTGGAGGAAAGTTGATTCTTAGGCGAATTTTTGAGGTTGTTGCAGAAGCAAGAAGCTCAGAGGCATTTGTGGCCCTTTGCCTGCTGACAGTTGCTGGCACTTCACTAATCACTCAGAAATTGGGCTTTAGTGATACGCTGGGAGCATTTTTGGCTGGGGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCAGATATTAGGCCATTTAGGGGCTTGCTCCTTGGGTTATTCTTTGTTACCACAGGGACCTCCATTGATATCCAGCTCCTGTTCCGAGAATGGCCAAATGTTCTTGCACTTTTGGCAGGTTTAATAGCAATCAAGACCCTTATAATAACGGCAATAGGTCCCCGGGTGGGGCTCACTACACAAGAAAGTATAAGAATAGGATTTCTTCTATCTCAAGGAGGCGAGTTCGGATTTGTAGTGTTTTCTCTAGCTAACAGGCTTGGAGTGCTACCACTTGAGTTAAACAAGCTGCTCATCATTATTGTTGTCTTGTCAATGGCTCTAACCCCCTTGCTTAATGAAGCTGGACGAAAGGCATCGGAATTCATCAGCGAAAAGTACAAGACAGAGGATAAAGCTGCAGACACGGTGAATTTTGATGCGACTGAACCTGTTGTTGTTGTTGGATTTGGACAAATGGGTCAGGTCTTGGCGAATTTCTTATCTACAACTTTGGTGTCTGGGGCAGATGGGGATACTCCTGGATGGCCATATGTAGCATTTGACATTGATCTTTCCGTAGTGAAGAGGTCAAGAAAACTTGGTTTTCCTGTTCTCTATGGAGACGGATCACGACCAGCAGTTTTGCAATCTGCTGGAATCTCTTCCCCAAAAGCTGTCATGGTTATGTTCACAGAGAAGAAGGCAACAATTGAGGCTGTTGAAAAACTCCGGCTTGCTTTCCCAGCGATTCCAATTTATGCCCGAGCTAAGGACGTGGTGCATCTATTAGATTTAAAGAATGCAGGTGCGACGGATGCTATTCTGGAAGATGCTGAGACTAGTTTACAACTTGGGTCAAAGCTTTTGAAAGGGCTCGGCGTCATGTCTGACCAAGTGTCTTTCCTCAGTCAGATGGTTCGCGACTCGATGGAAACAAAAGCTCAAGATGCACTCGACAAATCCAATGAGCAAGAGTTAGAAATTATGAAACCGCTGCAGATACGTGTGAAGGACTCGATCGAGTCCCCCGAGAACGAACTATCAAGGCTGAACGGGGAAGATAATACTCAGATCTTAAATGGCAAAGGGATGGATCAAAGGAAGCCTGAAGATTTAGATGGAAAGGGAGTCCTATACTGTGAACTTGATACAGATGTGGTAGAGCCCCCAACCCCTTACATAACAGCCTCAGATGGTTTAGAAAAGTGA 2382 44.0 MLEPVSCCQSSQSQIYSVVKQKNPFRAYSHTVRQLCGPSFNLHYSHSKKVAVPSCTINCWRNNCSLVPVLFHNSATKLTFKVDGPNGYNWSNHRPKPRERLRMRATLEVAAAVDVINDLGLDTLTFLAVTVVVVPLFRRIKASPILGFFFAGIVLNQFGVIRNIVDVKVLSEWGILFLLFEMGLELSFARLKALAKFAFGMGLTQVILSTIAFTAFELPPNGAIGTRILEFLFHARSDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELATRLGSATLGILLLQDIAVVPLLVVLPVLESQNLGTESIWPMLAQESLKALGGLGLLSLGGKLILRRIFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDIQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESIRIGFLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASEFISEKYKTEDKAADTVNFDATEPVVVVGFGQMGQVLANFLSTTLVSGADGDTPGWPYVAFDIDLSVVKRSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMFTEKKATIEAVEKLRLAFPAIPIYARAKDVVHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFLSQMVRDSMETKAQDALDKSNEQELEIMKPLQIRVKDSIESPENELSRLNGEDNTQILNGKGMDQRKPEDLDGKGVLYCELDTDVVEPPTPYITASDGLEK 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7532367 7542681 - Hsped.02g06860.1 Hepe02g0686 562187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Hepe02g0686 793 FunFam K(+) efflux antiporter 3, chloroplastic 118 517 - -
Hepe02g0686 793 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 542 680 IPR036291 -
Hepe02g0686 793 Coils Coil 698 718 - -
Hepe02g0686 793 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 21 724 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
Hepe02g0686 793 Pfam Sodium/hydrogen exchanger family 129 510 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Hepe02g0686 793 Pfam TrkA-N domain 542 665 IPR003148 GO:0006813(InterPro)
Hepe02g0686 793 Gene3D - 118 518 IPR038770 -
Hepe02g0686 793 Gene3D - 541 711 - -
Hepe02g0686 793 ProSiteProfiles RCK N-terminal domain profile. 541 673 IPR003148 GO:0006813(InterPro)
Hepe02g0686 793 MobiDBLite consensus disorder prediction 732 763 - -
Hepe02g0686 793 FunFam Glutathione-regulated potassium-efflux system protein KefB 539 711 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Hepe02g0686 Hepe-Chr2:7532367 Hepe05g1930 Hepe-Chr5:69608796 1.09e-100 dispersed
Hepe02g0686 Hepe-Chr2:7532367 Hepe08g1388 Hepe-Chr8:16310091 8.93e-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Hepe02g0686 K03455 - csv:101209266 1308.12